DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptpmeg2 and clr-1

DIOPT Version :10

Sequence 1:NP_572576.1 Gene:Ptpmeg2 / 31907 FlyBaseID:FBgn0028341 Length:827 Species:Drosophila melanogaster
Sequence 2:NP_001022209.1 Gene:clr-1 / 3565419 WormBaseID:WBGene00000548 Length:1444 Species:Caenorhabditis elegans


Alignment Length:459 Identity:128/459 - (27%)
Similarity:196/459 - (42%) Gaps:100/459 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   416 EPNENITINGLSPSHRQAANNSSSSSSSAATVANPL-----KLNTSGSADNNST-----ITNATT 470
            |.|.....||..|:..:...:.|.|.:|....|:|:     :|:.||.|...|.     :.:..:
 Worm   679 ELNRKDVRNGADPNIFRNLIDKSVSPTSRTRTASPMSRHLRQLHLSGPAYGYSAYFKPILLDTES 743

  Fly   471 AAGAAGA--------------AAGTT---TNGGGEFWSENPPSSASSGFSD--DDSLAGQEGDPK 516
            ::...|.              |.|.|   .|..|...|...|........|  :.:|..|.....
 Worm   744 SSSGFGIFMKIILPFLLFLAFATGVTMFFVNRKGHMLSTWCPLFTKMTSKDVVERTLLKQTFGAI 808

  Fly   517 PIDQIVQMVKQRGRHGLIKEYADIRNRAPEGTFLHAR----------------MRANLTKNRYTD 565
            |:|.            |..||. :|:|  :..||.|:                .:.|..||||.|
 Worm   809 PVDD------------LPTEYV-VRHR--DTDFLFAQEYESLPHFQLDTVASNRKENAIKNRYND 858

  Fly   566 VLCYDHSRVVLAHEDGDEPSDYINANFVDGYKQKNAYISTQGPLPKTSQDFWRMIWEQHCLVIVM 630
            :..:|.:||.|...:||:.||||||||:..:|:|..:|:.|.|:..|..|||||:|||...:|||
 Worm   859 IRAFDDTRVKLKKINGDDYSDYINANFIKSWKEKKLFIAAQAPVDATIGDFWRMVWEQESYLIVM 923

  Fly   631 TTRVMERGRVKCGQYWEPTEESSLEFGDYHVRTISVECNEDYMVASLELRNIK------------ 683
            ...:.|:.|.:|.:||  .:|....:||..|...|...:.||.:.:.::.:|.            
 Worm   924 VANLTEKNRQQCAKYW--PDEQITRYGDIIVEPASFSFHSDYAIRAFDIAHIGECGPDVIPNGNG 986

  Fly   684 -------------TDEIRNVSHWQFTSWPDYGVPSSAMAMLNFLQKVREKQAQLVQGLGDTWAGH 735
                         .:..|.:..:.||:|.||..|..:..:|.|:.::||    |.|.        
 Worm   987 VEYANVPIVKGQFANNSRRILQYHFTNWNDYKAPECSTGLLRFMYRLRE----LPQF-------- 1039

  Fly   736 PRGPPIVVHCSAGIGRTGTFITLDICISRLEDVGTADIRGTVEKIRSQRAYSIQMPDQYVFCHLA 800
             ...|:|:|||||:|||||||::|..:.:......|:|...|..:|.||...:|..:||||.:.|
 Worm  1040 -NNSPVVIHCSAGVGRTGTFISIDSMLDQCLAEDKANIFEFVCNLRRQRNLMVQSLEQYVFIYKA 1103

  Fly   801 LIEY 804
            |.|:
 Worm  1104 LAEW 1107

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptpmeg2NP_572576.1 CRAL_TRIO_N <114..144 CDD:215024
SEC14 170..314 CDD:469559
PTPc-N9 529..799 CDD:350391 97/310 (31%)
clr-1NP_001022209.1 FN3 403..523 CDD:238020
PTPc 827..1106 CDD:214550 93/293 (32%)
PTPc 1169..1437 CDD:214550
Blue background indicates that the domain is not in the aligned region.

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