DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ptpmeg2 and Ptpn20

DIOPT Version :10

Sequence 1:NP_572576.1 Gene:Ptpmeg2 / 31907 FlyBaseID:FBgn0028341 Length:827 Species:Drosophila melanogaster
Sequence 2:NP_001073618.1 Gene:Ptpn20 / 306281 RGDID:1309812 Length:421 Species:Rattus norvegicus


Alignment Length:424 Identity:115/424 - (27%)
Similarity:200/424 - (47%) Gaps:74/424 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   410 AASAATEPNENITINGLSPSHRQAANNSSSSSSSAATVANPLKLNTSGSADNNSTITNATTAAGA 474
            ::|....|.:.:..|.::....:.:::.|.|:........|::      :||:.|:.:....:..
  Rat    33 SSSQQKTPTKPVFGNKVNSESVKTSHHMSFSNKYDLVFPEPVE------SDNDETLWDVRDLSHR 91

  Fly   475 AGAAAGTTTNGGGEFWSENPPSSAS---------SGFSDDDSLAGQEGDPKPIDQIVQM------ 524
                         ..||...|.||.         |..|.|.:::.:|     :.|:.|:      
  Rat    92 -------------NRWSSVDPESAGPSKTVSTVLSESSTDTAVSERE-----LTQLAQIRPLIFN 138

  Fly   525 -------------VKQRGRHGLIKEYADIRNRAPEGTFLHARMRANLTKNRYTDVLCYDHSRVVL 576
                         ::::....:|:|:.::....|...|.......|..||||.|:|.||.:||.|
  Rat   139 SSSRAALRDCLKALQKKEELDIIREFLELEEMIPPDDFKSGYELQNRDKNRYRDILPYDSTRVPL 203

  Fly   577 AHEDGDEPSDYINANFVD--GYKQKNAYISTQGPLPKTSQDFWRMIWEQHCLVIVMTTRVMERGR 639
            .     :..|||||:::.  .::::..||:||||||.|.:|||:|:.|.:|.||.|.||.:|.|.
  Rat   204 G-----KNKDYINASYIRIVNHEEEYFYIATQGPLPDTIEDFWQMVLENNCNVIAMITREIEGGV 263

  Fly   640 VKCGQYWEPTEESSLEFGDYHVRTISVECNEDYMVASLELRNIKTDEIRNVSHWQFTSWPDYGVP 704
            :||..||..:.:..|||..:||...:.:..:.:::...::....|.:..:|.|.||..|||:|.|
  Rat   264 IKCCSYWPVSLKEPLEFKHFHVLLENFQITQYFVIRIFQIVKKSTGKSHSVKHLQFIKWPDHGTP 328

  Fly   705 SSAMAMLNFLQKVREKQAQLVQGLGDTWAGHPRGPPIVVHCSAGIGRTGTFITLDICISRLEDVG 769
            :||...:.:::.||:              .|..| |::||||||:||||.||.:|:....:|...
  Rat   329 ASADFFIKYVRYVRK--------------SHITG-PLLVHCSAGVGRTGVFICVDVVFCTIEKNY 378

  Fly   770 TADIRGTVEKIRSQRAYSIQMPDQYVFCHLALIE 803
            :.:|...|.::|.||...||..:||.||:..::|
  Rat   379 SFNIMNIVTQMRKQRFGMIQTKEQYQFCYEIVLE 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptpmeg2NP_572576.1 CRAL_TRIO_N <114..144 CDD:215024
SEC14 170..314 CDD:469559
PTPc-N9 529..799 CDD:350391 94/271 (35%)
Ptpn20NP_001073618.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..58 3/24 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 93..116 6/22 (27%)
PTP_DSP_cys 209..415 CDD:475123 78/219 (36%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.