DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptpmeg2 and Ptprm

DIOPT Version :10

Sequence 1:NP_572576.1 Gene:Ptpmeg2 / 31907 FlyBaseID:FBgn0028341 Length:827 Species:Drosophila melanogaster
Sequence 2:NP_001162103.1 Gene:Ptprm / 29616 RGDID:620776 Length:1486 Species:Rattus norvegicus


Alignment Length:941 Identity:224/941 - (23%)
Similarity:342/941 - (36%) Gaps:270/941 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 TATSPSTSSSSASSTQNLIAVVPPQLQ-QLQVQLPAPGGGGGAGAGGGGGGGGGAAPVRRHISHT 121
            ||:..........||...|..:.|..: ::.|.|..||       .||.|..|.|...|.    .
  Rat   322 TASGSWNDRQPVDSTSYKIGHLDPDTEYEISVLLTRPG-------EGGTGSPGPALRTRT----K 375

  Fly   122 TAVKFLYARKFDIPRAVSLYEQHEQIRLKEYLYNID---------------PDVEPLRSELQTG- 170
            .|......||.::   |.:..:...||.:.:.||:.               ...|.:|.|:... 
  Rat   376 CADPMRGPRKLEV---VEVKSRQITIRWEPFGYNVTRCHSYNLTVRYCYQVGGQEQVREEVSWDM 437

  Fly   171 -----KFTILPARTSSGAAIALFTAN-----RHSPLSVS---------HTTTLQGIVYQLDSALQ 216
                 :.||......:..::.|...|     ....|:|.         .|.::||..::....||
  Rat   438 DNSHPQHTITNLSPYTNVSVKLILMNPEGRKESQELTVQTDEDLPGAVPTESIQGSAFEEKIFLQ 502

  Fly   217 DSE-TQRAGLVFIYDMSGSKYSNFD--YDLSQKI----------------------------LTL 250
            ..| ||..|::.:|:::....|:||  .|||.:.                            .:.
  Rat   503 WREPTQTYGVITLYEITYKAVSSFDPEIDLSNQSGRVSKLGNETHFLFFGLYPGTTYSFTIRAST 567

  Fly   251 LKG-GYPARLKKVLIVTAP-------------------LWFK------APFKILRLFVREKLRER 289
            .|| |.||..:....::||                   :..|      ||..:.::.|.|:...|
  Rat   568 AKGFGPPATNQFTTKISAPSMPAYEFETPLNQTDNTVTVLLKPAQSRGAPVSVYQIVVEEERPRR 632

  Fly   290 V---------------------------FTVSVPQLALH---------------------VPRKA 306
            .                           |....|..:|.                     :|.|:
  Rat   633 TKKTTEILKCYPVPIHFQNASILNSQYYFAAEFPADSLQAAQPFTIGDNKTYNGYWNTPLLPHKS 697

  Fly   307 LPIHLGGTLEVDHATWLLSCRQSMTNRE---DELLANIVGVGGGSGSGSAAGSAA-------IVS 361
            ..|:.......:..| .:.|.:..|...   .:|....:.:...:|.|...|:..       ...
  Rat   698 YRIYYQAASRANGET-KIDCVRVATKAAIIVTQLTTPYIRIAPAAGDGQLTGAVTPKPVPEPEKG 761

  Fly   362 TNGTETEAATTAATIISAVHQLGDNNTTVVTVSNGVGPAGSASGGATTAASAATEPNENITINGL 426
            |:.|...|...|..::..:..||     ||.|   :.....|.....|.:|  |.....:.:|.:
  Rat   762 TDHTVKIAGVIAGILLFVIIFLG-----VVLV---MKKRKLAKKRKETMSS--TRQEMTVMVNSM 816

  Fly   427 SPSHRQAANNSSSSSS-------SAATVANP----LKLNTSGSADNNS---------TITNAT-T 470
            ..|:.:...|...:.|       :..:|::|    :|.||..::..||         .|.:.| |
  Rat   817 DKSYAEQGTNCDEAFSFMDTHNLNGRSVSSPSSFTMKTNTLSTSVPNSYYPDPFVPTAILDETHT 881

  Fly   471 AAGAAGAAAGTTTNGGGEFWSENPPSSASSGFSDDDSLAG--------------QEGDPKP---- 517
            .|                              ||..|||.              |.|...|    
  Rat   882 MA------------------------------SDTSSLAQPHTYKKREAADVPYQTGQLHPAIRV 916

  Fly   518 ---IDQIVQMVKQRGRHGLIKEYADI--RNRAPEGTFLHARMRANLTKNRYTDVLCYDHSRVVLA 577
               :..|.||....| :|..:||...  ...||..:   |:...|..||||.:::.||||||.|.
  Rat   917 ADLLQHITQMKCAEG-YGFKEEYESFFEGQSAPWDS---AKKDENRMKNRYGNIIAYDHSRVRLQ 977

  Fly   578 HEDGDEPSDYINANFVDGYKQKNAYISTQGPLPKTSQDFWRMIWEQHCLVIVMTTRVMERGRVKC 642
            ..:||..|||||.|::|||.:.|.||:||||:.:|..|||||:|.::...|:|.|.::|.|||||
  Rat   978 MLEGDNSSDYINGNYIDGYHRPNHYIATQGPMQETVYDFWRMVWYENTASIIMVTNLVEVGRVKC 1042

  Fly   643 GQYWEPTEESSLEFGDYHVRTISVECNEDYMVASLELRNIKTDEIRNVSHWQFTSWPDYGVPSSA 707
            .:||....|.   :.|..|..|..|...:|::.:..:......|||.:..:.||.|||:|||..|
  Rat  1043 CKYWPDDTEI---YKDIKVTLIDTELLAEYVIRTFAVEKRGIHEIREIRQFHFTGWPDHGVPYHA 1104

  Fly   708 MAMLNFLQKVREKQAQLVQGLGDTWAGHPRGPPIVVHCSAGIGRTGTFITLDICISRLEDVGTAD 772
            ..:|.|:::|:.|..             |...|:|||||||.||||.||.:||.:...|..|..|
  Rat  1105 TGLLGFVRQVKSKSP-------------PNAGPLVVHCSAGAGRTGCFIVIDIMLDMAEREGVVD 1156

  Fly   773 IRGTVEKIRSQRAYSIQMPDQYVFCHLALIE 803
            |...|.::||:|...:|..:||||.|.|::|
  Rat  1157 IYNCVRELRSRRVNMVQTEEQYVFIHDAILE 1187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptpmeg2NP_572576.1 CRAL_TRIO_N <114..144 CDD:215024 5/29 (17%)
SEC14 170..314 CDD:469559 41/268 (15%)
PTPc-N9 529..799 CDD:350391 107/271 (39%)
PtprmNP_001162103.1 MAM 22..182 CDD:214533
ig 192..274 CDD:395002
FN3 209..>638 CDD:442628 62/329 (19%)
fn3 499..574 CDD:394996 16/74 (22%)
R-PTPc-M-1 918..1190 CDD:350481 113/290 (39%)
R-PTPc-M-2 1276..1481 CDD:350483
Blue background indicates that the domain is not in the aligned region.

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