DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptpmeg2 and Ptpra

DIOPT Version :10

Sequence 1:NP_572576.1 Gene:Ptpmeg2 / 31907 FlyBaseID:FBgn0028341 Length:827 Species:Drosophila melanogaster
Sequence 2:XP_006235068.1 Gene:Ptpra / 25167 RGDID:3450 Length:805 Species:Rattus norvegicus


Alignment Length:530 Identity:161/530 - (30%)
Similarity:234/530 - (44%) Gaps:110/530 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   355 GSAAIVSTNGTE-------TEAATTAATIISAVHQLGDNNT---TVVTV------SNGVGPAGSA 403
            |:..::.|:.||       |..:|::...:|.......|.|   |.||.      .||...|.|.
  Rat    30 GTTRLIKTSTTESAKEENKTSNSTSSVISLSVTPTFSPNLTLEPTYVTTVNSSHSDNGTKRAAST 94

  Fly   404 SGGATTAA---------------SAATEPNE-NITINGLSPSHRQAANNSSSSSSSAATVANPL- 451
            ..|.||.:               .|.|||.| |.:....:|.....|.||.|......|   |: 
  Rat    95 ESGGTTISPNGTYGTWLTDNQFTDARTEPWEGNSSTAATTPETFPPAGNSDSKDRRDET---PII 156

  Fly   452 -------------------------KLNTSGSADNNSTITNATTAAGAAGAAAGTTTNGGGEFWS 491
                                     |...:||..|:..::|..|.                :...
  Rat   157 AVMVALSSLLVIVFIIIVLYMLRFKKYKQAGSHSNSFRLSNGRTE----------------DVEP 205

  Fly   492 ENPPSSASSGFSDDDSLAGQEGDPKPIDQIVQMVKQR--GRHGLIKEYADIRNRAP-EGTFLHAR 553
            ::.|..|.|..::      ::..|.|:|::.:.:.:|  ..:.|.:|..:.....| :.|...|.
  Rat   206 QSVPLLARSPSTN------RKFPPLPVDKLEEEINRRMADDNKLFREEFNALPACPIQATCEAAS 264

  Fly   554 MRANLTKNRYTDVLCYDHSRVVLAHEDGDEPSDYINANFVDGYKQKNAYISTQGPLPKTSQDFWR 618
            ...|..||||.::|.||||||.|...:|...||||||:|::||::||.:|:.|||..:|..||||
  Rat   265 KEENKEKNRYVNILPYDHSRVHLTPVEGVPDSDYINASFINGYQEKNKFIAAQGPKEETVNDFWR 329

  Fly   619 MIWEQHCLVIVMTTRVMERGRVKCGQYWEPTEESSLEFGDYHVRTISVECNEDYMVASL------ 677
            |||||:...|||.|.:.||...||.|||  .::....:|:..|....|....||.|...      
  Rat   330 MIWEQNTATIVMVTNLKERKECKCAQYW--PDQGCWTYGNVRVSVEDVTVLVDYTVRKFCIQQVG 392

  Fly   678 ELRNIKTDEIRNVSHWQFTSWPDYGVPSSAMAMLNFLQKVREKQAQLVQGLGDTWAGHPRGPPIV 742
            ::.|.|..  |.::.:.||||||:|||.:.:.||.||:||:....|        :||     .||
  Rat   393 DVTNRKPQ--RLITQFHFTSWPDFGVPFTPIGMLKFLKKVKACNPQ--------YAG-----AIV 442

  Fly   743 VHCSAGIGRTGTFITLDICISRLEDVGTADIRGTVEKIRSQRAYSIQMPDQYVFCHLALIE-YAY 806
            ||||||:||||||:.:|..:..:......|:.|.|.:||:||...:|...||||.:.||:| |.|
  Rat   443 VHCSAGVGRTGTFVVIDAMLDMMHSERKVDVYGFVSRIRAQRCQMVQTDMQYVFIYQALLEHYLY 507

  Fly   807 SRGMLQTVDL 816
            ....|:...|
  Rat   508 GDTELEVTSL 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptpmeg2NP_572576.1 CRAL_TRIO_N <114..144 CDD:215024
SEC14 170..314 CDD:469559
PTPc-N9 529..799 CDD:350391 109/276 (39%)
PtpraXP_006235068.1 PHA03255 <18..177 CDD:165513 32/149 (21%)
R-PTPc-A-1 217..512 CDD:350469 118/317 (37%)
R-PTPc-A-2 566..793 CDD:350471
Blue background indicates that the domain is not in the aligned region.

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