DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptpmeg2 and Ptprc

DIOPT Version :10

Sequence 1:NP_572576.1 Gene:Ptpmeg2 / 31907 FlyBaseID:FBgn0028341 Length:827 Species:Drosophila melanogaster
Sequence 2:NP_612516.2 Gene:Ptprc / 24699 RGDID:3451 Length:1273 Species:Rattus norvegicus


Alignment Length:801 Identity:198/801 - (24%)
Similarity:299/801 - (37%) Gaps:237/801 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   165 SELQTGKFTILPARTSSGAAIALFTANRHSPLSVSHTTTLQGIVYQLDSALQDSETQRAGLVFIY 229
            :::.:|.....||.::.|.|              |:|||...|.........|.:.....:.:||
  Rat   157 TDISSGANLTTPAPSTLGFA--------------SNTTTSTEIATPQTKPSCDEKFGNVTVRYIY 207

  Fly   230 D---------MSGSKYSNFDY-----------DLSQKILTLLKGGYPARLKKVLIVTAPLWFKAP 274
            |         :.|.|....:|           :.|||.:||..|..                 .|
  Rat   208 DDSSKNFNANLEGDKKPKCEYTDCEKELKNLPECSQKNVTLSNGSC-----------------TP 255

  Fly   275 FKILRLFV------------------------REKLRERVFTVSVPQLALH---VPR-KALPIHL 311
            .||:.|.|                        ..|::.: ||..:.:::.:   .|. |...:..
  Rat   256 DKIINLDVPPGTHNFNLTNCTPDIEANTSICLEWKIKNK-FTCDIQKISYNFRCTPEMKTFALDK 319

  Fly   312 GGTLEVDHATWL--LSCRQSMTNREDELLANIVGVGGGSGSGSAAGSAAIVSTNGTETEAATTAA 374
            .|||      ||  |:.|.:.|...:.|..|::               .:......:|:..|.. 
  Rat   320 HGTL------WLHNLTVRTNYTCAAEVLYNNVI---------------LLKQDRRVQTDFGTPE- 362

  Fly   375 TIISAVHQLGDNNTTVVTVSNGVGPAGSASGGATTAASAATEPNENIT-------INGLSP---- 428
               ...|....|:|...|:.:...||....|.........:|..||:.       :..|.|    
  Rat   363 ---MLPHVQCKNSTNSTTLVSWAEPASKHHGYILCYKKTPSEKCENLANDVNSFEVKNLRPYTEY 424

  Fly   429 --------SHRQAANNSSSSSSSAATVANPLKLN---TSGSADNNSTIT-------NATTA---- 471
                    ..|...|..:...:.....|.|.|:|   ||.::||:..:|       |...|    
  Rat   425 TVSLFAYVIGRVQRNGPAKDCNFRTKAARPGKVNGMKTSRASDNSINVTCNSPYEINGPEARYIL 489

  Fly   472 -AGAAGAAAGTTTNGGGEFWSEN-------------------------PPSSA------------ 498
             ..:.|:...|......:|..:|                         |.|::            
  Rat   490 EVKSGGSLVKTFNQSTCKFVVDNLYYSTDYEFLVYFYNGEYLGDPEIKPQSTSYNSKALIIFLVF 554

  Fly   499 -----------------------SSGFSDDDSLAGQEG-------DPKPIDQIVQMVKQR----G 529
                                   ||...:...|..::.       ||...|.:::..|::    |
  Rat   555 LIIVTSIALLVVLYKIYDLRKKRSSNLDEQQELVERDEEKQLINVDPIHSDLLLETYKRKIADEG 619

  Fly   530 RHGLIKEYADIRNRAPEGTFLHARMRANLTKNRYTDVLCYDHSRVVLAHEDGDEPSDYINANFVD 594
            |. .:.|:..|.....:.....||...|..||||.|:|.||::||.|:..:||..|.||||:::|
  Rat   620 RL-FLAEFQSIPRVFSKFPIKDARKSQNQNKNRYVDILPYDYNRVELSEINGDAGSTYINASYID 683

  Fly   595 GYKQKNAYISTQGPLPKTSQDFWRMIWEQHCLVIVMTTRVMERGRVKCGQYWEPTEESSLEFGDY 659
            |:|:...||:.|||..:|..|||:|||||...||||.||..|..|.||.:||...||.:..|   
  Rat   684 GFKEPRKYIAAQGPRDETVDDFWKMIWEQKATVIVMVTRCEEGNRNKCAEYWPCMEEGTRTF--- 745

  Fly   660 HVRTISVECNE-----DYMVASLELRNIKTDEI-RNVSHWQFTSWPDYGVPSSAMAMLNFLQKVR 718
              |.:.|..|:     ||::..|.:.:.|.... |.|:|.|||||||:|||...    :.|.|:|
  Rat   746 --RDVVVTINDHKRCPDYIIQKLSIAHKKEKATGREVTHIQFTSWPDHGVPEDP----HLLLKLR 804

  Fly   719 EKQAQLVQGLGDTWAGHPRGPPIVVHCSAGIGRTGTFITLDICISRLEDVGTADIRGTVEKIRSQ 783
            .:    |....:.::|     |||||||||:|||||:|.:|..:..||..|..|:.|.|..:|.|
  Rat   805 RR----VNAFSNFFSG-----PIVVHCSAGVGRTGTYIGIDAMLESLEAEGKVDVYGYVVNLRRQ 860

  Fly   784 RAYSIQMPDQYVFCHLALIEY 804
            |...:|:..||:..|.||:||
  Rat   861 RCLMVQVEAQYILIHQALVEY 881

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptpmeg2NP_572576.1 CRAL_TRIO_N <114..144 CDD:215024
SEC14 170..314 CDD:469559 33/191 (17%)
PTPc-N9 529..799 CDD:350391 110/275 (40%)
PtprcNP_612516.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 45..192 10/48 (21%)
PHA03255 82..>191 CDD:165513 10/47 (21%)
CD45 203..259 CDD:432641 14/72 (19%)
FN3 366..431 CDD:238020 12/64 (19%)
FN3 454..534 CDD:238020 14/79 (18%)
Wzy_O6_O28 521..>580 CDD:468211 3/58 (5%)
R-PTPc-C-1 676..876 CDD:350405 89/217 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 960..984
R-PTP-C-2 986..1191 CDD:350406
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1219..1273
Blue background indicates that the domain is not in the aligned region.

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