DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ptpmeg2 and Ptpn13

DIOPT Version :10

Sequence 1:NP_572576.1 Gene:Ptpmeg2 / 31907 FlyBaseID:FBgn0028341 Length:827 Species:Drosophila melanogaster
Sequence 2:NP_035334.2 Gene:Ptpn13 / 19249 MGIID:103293 Length:2451 Species:Mus musculus


Alignment Length:952 Identity:234/952 - (24%)
Similarity:341/952 - (35%) Gaps:273/952 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 LFLC-IAKAVKQFID--LCNNLGANCSTTTATSPSTSSSSASSTQNLIAVVPPQLQQLQVQLPAP 93
            |.|| .|..|...||  ..|.|.:..::...:|..||..|:|..|                    
Mouse  1573 LLLCRPAPGVLPEIDTTFLNPLYSPANSFLNSSKETSQPSSSVEQ-------------------- 1617

  Fly    94 GGGGGAGAGGGGGGGGG------AAPVRR--HISHTTA--------------VKFLYARKFDIPR 136
                  ||.....|..|      .||.||  :..|:.:              |..:.|...:.||
Mouse  1618 ------GASSDDNGVSGKTKNHCRAPSRRESYSDHSESGEDDSVRAPAKMPNVTRVAAFPHEAPR 1676

  Fly   137 AVSLYEQHEQIRLKEYLYNIDP-------------DVEPLRSELQTGKFTILPARTSSGAAIALF 188
            :     |.|.|....||....|             ||.|       |:....||..:...|....
Mouse  1677 S-----QEESICAMFYLPRKIPGKLESESSHPPPLDVSP-------GQTCQPPAECAPSDATGKH 1729

  Fly   189 TANRHSPLS-VSHTTTLQGIVYQLDSALQDSE-----------TQRAGLVFIYDMSGSKYSNFDY 241
            ..:..|.|| ..:.|||:.   .|.:.|:|||           :::..|.|...........:.:
Mouse  1730 FTHLASQLSKEENITTLKN---DLGNHLEDSELEVELLITLVKSEKGSLGFTVTKGSQSIGCYVH 1791

  Fly   242 DLSQ---KILTLLKGGYPARLKKV---------------LIVTAPLWFKAPFKILRLF---VREK 285
            |:.|   |....||.|  .||.||               |:..||       |.:||.   :.|.
Mouse  1792 DVIQDPAKGDGRLKAG--DRLIKVNDTDVTNMTHTDAVNLLRAAP-------KTVRLVLGRILEL 1847

  Fly   286 LRERVFTVSVPQLALHVPRKALPIHLGGTLEVDHATWLLS----CRQSMTNREDELLANIVGVGG 346
            .|..||...:|.:.:....:.|...|.|.....|....:|    ...:..:...:||..|..|.|
Mouse  1848 PRMPVFPHLLPDITVTCHGEELGFSLSGGQGSPHGVVYISDINPRSAAAVDGSLQLLDIIHYVNG 1912

  Fly   347 GSGSGSAAGSA--AI----------VSTNGTETEAATTAATIISAVHQLGDNNTTVVTVS----- 394
            .|..|.....|  |:          |:.:|......|.||  |||......|..|.:..|     
Mouse  1913 VSTQGMTLEDANRALDLSLPSVVLKVTRDGCPVVPTTRAA--ISAPRFTKANGLTSMEPSGQPAL 1975

  Fly   395 ---------NGVG------PAGSASGGATTAASAATE--------------PNENITINGLSPSH 430
                     ||.|      |||..|......::..||              |.|...|..|....
Mouse  1976 MPKNSFSKVNGEGVHEAVCPAGEGSSSQMKESAGLTETKESNSRDDDIYDDPQEAEVIQSLLDVV 2040

  Fly   431 RQAANNSSSSSSSAATVANPLKLNTSGSADNNSTITNATTAAGAAGAAAGTTTNGGGEFWSENPP 495
            .:.|.|..:...:.....:|..|.|:|.|...                 |.|...|... .|:.|
Mouse  2041 DEEAQNLLNQRHATRRACSPDPLRTNGEAPEE-----------------GDTDYDGSPL-PEDVP 2087

  Fly   496 SSASSGFSDDD--SLAGQEGDPKPIDQ----------------------------------IVQM 524
            .|.|||....|  ||.....:.|||::                                  .|..
Mouse  2088 ESVSSGEGKVDLASLTAASQEEKPIEEDATQESRNSTTETTDGEDSSKDPPFLTNEELAALPVVR 2152

  Fly   525 VKQRGRH-------------GLI------KEYADIRNRAPEGTFLHARMRANLTKNRYTDVLCYD 570
            |...|::             ||:      ||..:::...|....|..:.:.|..||||.::|.||
Mouse  2153 VPPSGKYTGTQLQATIRTLQGLLDQGIPSKELENLQELKPLDQCLIGQTKENRRKNRYKNILPYD 2217

  Fly   571 HSRVVLAHEDGDEPSDYINANFVD---GYKQKNAYISTQGPLPKTSQDFWRMIWEQHCLVIVMTT 632
            .:||.|..|.|     ||||:|:.   | .|:..||:.|||||.|..|||:|:|||:..||.|.|
Mouse  2218 TTRVPLGDEGG-----YINASFIRIPVG-TQEFVYIACQGPLPTTVGDFWQMVWEQNSTVIAMMT 2276

  Fly   633 RVMERGRVKCGQYWEPTEESSLEFGDYHVR--TISVECNEDYMVASLELRNIKTDEIRNVSHWQF 695
            :.:|..::||.:|| |:...:....:..:|  .:.::..:.::|..:.|.:|:|.|:|::||..|
Mouse  2277 QEVEGEKIKCQRYW-PSILGTTTMANERLRLALLRMQQLKGFIVRVMALEDIQTGEVRHISHLNF 2340

  Fly   696 TSWPDYGVPSSAMAMLNFLQKVREKQAQLVQGLGDTWAGHPRGPPIVVHCSAGIGRTGTFITLDI 760
            |:|||:..||....:|.|:..:|..:               |..|::.||||||||:||.|.:|:
Mouse  2341 TAWPDHDTPSQPDDLLTFISYMRHIR---------------RSGPVITHCSAGIGRSGTLICIDV 2390

  Fly   761 CISRLEDVGTADIRGTVEKIRSQRAYSIQMPDQYVFCHLALI 802
            .:..:......||...|..:|.||...:|...|||||:..::
Mouse  2391 VLGLISQDLEFDISDLVRCMRLQRHGMVQTEGQYVFCYQVIL 2432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptpmeg2NP_572576.1 CRAL_TRIO_N <114..144 CDD:215024 7/45 (16%)
SEC14 170..314 CDD:469559 40/176 (23%)
PTPc-N9 529..799 CDD:350391 97/293 (33%)
Ptpn13NP_035334.2 KIND 3..190 CDD:214801
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 183..227
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 253..285
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 429..457
FERM_F1_PTPN13 564..659 CDD:340715
B41 566..774 CDD:214604
PH-like 770..870 CDD:473070
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 944..966
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1007..1063
PDZ1_PTPN13-like 1081..1172 CDD:467285
PTN13_u3 1168..1356 CDD:465189
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1199..1356
PDZ2-PTPN13_FRMPD2-like 1354..1440 CDD:467254
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1441..1478
PDZ3_PTPN13_FRMPD2-like 1489..1578 CDD:467181 3/4 (75%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1602..1662 15/85 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1695..1726 6/37 (16%)
PDZ4_PTPN13-like 1760..1844 CDD:467182 18/92 (20%)
PDZ5_PTPN13-like 1855..1941 CDD:467183 16/85 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1991..2024 6/32 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2051..2139 20/105 (19%)
PTPc-N13 2202..2435 CDD:350445 90/253 (36%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.