DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ptpmeg2 and R155.3

DIOPT Version :10

Sequence 1:NP_572576.1 Gene:Ptpmeg2 / 31907 FlyBaseID:FBgn0028341 Length:827 Species:Drosophila melanogaster
Sequence 2:NP_497485.1 Gene:R155.3 / 187909 WormBaseID:WBGene00020117 Length:1165 Species:Caenorhabditis elegans


Alignment Length:1001 Identity:184/1001 - (18%)
Similarity:326/1001 - (32%) Gaps:336/1001 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 QTQWNKDRQEDRNNNSGSRSEQDSGCHRRLFLCIAKAVKQFIDLCNNLGANCSTTTATSPSTSSS 67
            :.:|.||...|.:.|                  :|.|:.|.           .|..|::.....|
 Worm   181 EDKWIKDAVRDHSGN------------------LANALNQL-----------KTFEASTRKVHQS 216

  Fly    68 SASSTQNLIAVVPPQLQQLQVQLPAPGGGGGAGAGGGGGGGGGAAPVRRH-ISHTTAVKFLYARK 131
            ..|.     ||:..::.:::.::|...|.....|         ..|.:.| |..|.:||...:.|
 Worm   217 FVSE-----AVMLEEVSKIRSKIPKYSGLADKIA---------TLPSKIHEILGTPSVKLPTSDK 267

  Fly   132 FDIPRAVSLYEQ--------------HEQIRLKEYLYNIDPDVEPLRSELQTGK----------- 171
            ..:.:|:.|..|              .||::|.|....:...:|.:.   |.||           
 Worm   268 DKVDKAIPLMAQLPAQLKALEKLMNFSEQLKLPENAKKLGNIIEIVN---QDGKNQLENTLKMFK 329

  Fly   172 --------FT-ILPARTSSGAAIALFTANRHSPLSVSHTTTLQGIVYQLDSA---LQD------- 217
                    :| :||.:.:    :.|...|   |:   |.|. ..|:..||..   .||       
 Worm   330 SSTDVKEIYTLLLPVKDT----LELLKDN---PI---HETA-ANIISSLDKVEKFAQDMADFFTA 383

  Fly   218 ----SETQRAGLVF--IYDMSGSKYSNFDYDLSQKI--LTLLK------GGYPARLKKVLIVTAP 268
                .:.:.:.|:.  |..:...:.||..:.|:..:  |.::|      ..|...:||..     
 Worm   384 LNSIRQIEESSLIIPVITTIRQLRLSNDQFGLTTVLNNLPMIKTQLSSLTSYINSVKKTK----- 443

  Fly   269 LWFKAPFKILRLFVREKLRERVF---TVSVPQLALHVPRKALPIHLGGTL--EVDHATWLLSCRQ 328
               .|....|:.|.:..|..||.   |..:..:...|..|.| ..:|..:  ||:.....|:   
 Worm   444 ---HAETDALKDFEKIGLHSRVIGTATRGISNMQKLVDFKDL-ADIGDLVKSEVEKVKDQLN--- 501

  Fly   329 SMTNREDELLANIVGVGGGSGSGSAAGSAAIVSTNGTETEAATTA-------------------- 373
                  ||.:||:..:.|..|....| |..||....:.....:|:                    
 Worm   502 ------DENVANLKALAGIEGQLKTA-SGEIVGYKKSVKPVTSTSLPDYSTFFLDAKKVKGINLK 559

  Fly   374 -ATIISAVHQLGDNNTTVVTVSNGVGPAGSASGGATTAASAATEPNENITINGLSPSHRQAANNS 437
             ..|||::.:|  ||...:..|.....:....|...:..|.:     :|::: .:..|:....::
 Worm   560 LPAIISSMEKL--NNLVPIRSSRATRSSTQLDGYLLSLQSLS-----SISLD-FTKFHKSFDGST 616

  Fly   438 SSSSSSAATVANPLKLNTSGSADNNSTITNATTAAGAAGAAAGTTTNGGGEFWSENPPSSASSGF 502
            .|......:.|.           .|:|:|....||.|..:..|:::..||           |.|.
 Worm   617 QSLQDLGVSFAK-----------YNNTLTKQKAAAAAQKSGGGSSSASGG-----------SQGV 659

  Fly   503 SDDDS-----LAG------------------QEGDPK----------PIDQIVQMVK-------- 526
            .:.:|     :.|                  .:.||.          |::::.:.||        
 Worm   660 FESNSTIVLIVFGCIVFICVILIPASSWFYLHQKDPAARKCFAIRELPMEEVKKPVKKKDVSKMD 724

  Fly   527 -------QRGRHGLIKE---------------YADIRNRAPEG-------TFL------------ 550
                   ::.:...||:               |.|.|..|.:.       .||            
 Worm   725 NKPERELEKTQDESIKDVPKLILELDMSSAEKYVDCRYEALQDMHKETCIPFLSEELIKKFYGVK 789

  Fly   551 ------------HARMRANLTKNRYTDVLCYDHSRVVLAHEDGDEPSDYINANFV---DGYKQKN 600
                        ...:::...|.|....|..| :||||.........|||:||.|   .|.:   
 Worm   790 FDAMNEKYEVPGREALKSEQMKQRLPIPLVMD-TRVVLKDYGTLFNDDYIHANRVTCSHGLQ--- 850

  Fly   601 AYISTQGP-------LPKTSQDFWRMIWEQHCLVIVMTTRVMER--GRV-KCGQYWEPTEESSLE 655
             .|.:|.|       ...|.:.:|....::....:||.....|:  |:. .|.:|:..:...|::
 Worm   851 -LILSQAPQEANGESCESTIESYWWTAKQEKSTQLVMMCDFDEKCPGKTNSCARYYPESVGESMK 914

  Fly   656 FGDYHVRTISVEC-----NEDYMVASLELRNIKTD--EIRNVSHWQFTSWPDYGVPSSAMAMLNF 713
            |     :.::|||     .:|:....||   :|.|  |...|:|.:...|....|....:...:.
 Worm   915 F-----KNLTVECKSKIAEKDFETRELE---VKFDGHEPHTVTHSRLVGWNPLNVQPDTLLFTSL 971

  Fly   714 LQKVREKQAQLVQGLGDTWAGHPRGPPIVVHCSAGIGRTGTFITLDICISR-LEDVGTADIRGTV 777
            :||::....                 |::|||..||.|:..|.::.|.... ::.:|:..:...|
 Worm   972 IQKIKNSTT-----------------PVMVHCIDGISRSAAFASMIIGYQLVIQSLGSVKLEAVV 1019

  Fly   778 EKIRSQRAYSIQMPDQYVFCHLALIE 803
            ..||||||.:|....:..|....:::
 Worm  1020 SYIRSQRAMAITSALELAFVDAGIVK 1045

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptpmeg2NP_572576.1 CRAL_TRIO_N <114..144 CDD:215024 9/44 (20%)
SEC14 170..314 CDD:469559 36/190 (19%)
PTPc-N9 529..799 CDD:350391 70/336 (21%)
R155.3NP_497485.1 PTPc 802..1045 CDD:214550 62/272 (23%)

Return to query results.
Submit another query.