DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ptpmeg2 and C46A5.1

DIOPT Version :9

Sequence 1:NP_572576.1 Gene:Ptpmeg2 / 31907 FlyBaseID:FBgn0028341 Length:827 Species:Drosophila melanogaster
Sequence 2:NP_501277.1 Gene:C46A5.1 / 183497 WormBaseID:WBGene00016698 Length:497 Species:Caenorhabditis elegans


Alignment Length:450 Identity:108/450 - (24%)
Similarity:178/450 - (39%) Gaps:81/450 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   382 QLGDNNTTVVTVSNGVGPAGSASGGATTAASAATEP-NENITINGLSPSHRQAANNSSSSSSSAA 445
            |||:    ||.|.|...|            ....:| |:....:||.|.....:....:.|..:.
 Worm    86 QLGE----VVLVKNVKLP------------ETPQKPENDTPVKDGLKPPRTTNSVEKINLSKESF 134

  Fly   446 TVANPLKLNTSGSADNNSTITNATTAAGAAGAAAGTTTNGGGEFWSENPPSSASSGFSDDDSLAG 510
            .::|. |:.:....:......|..:.|.......|.:.....|...:.         :.||:..|
 Worm   135 NLSNE-KIASDNGTEEKMEKKNVDSPADIQDGLKGKSKQKSEEKVHQK---------AKDDAKRG 189

  Fly   511 QEGDPKPIDQ--------IVQMVKQRGRHGLIKEYADIRNRAP----EGTFLHARMRANLTKNRY 563
            .|.:...|..        :.|...:...:..:.|:..:....|    :..|:     :|:.|||:
 Worm   190 DECNKFKISDEKLTKWKLVAQETLKDDANIAVNEFEKVSGYLPPHISKNHFV-----SNMDKNRF 249

  Fly   564 TDVLCYDHSRVVLAHEDGDEPSDYINANFVDGYKQKNAYISTQGPLPKTSQDFWRMIWEQ--HCL 626
            .||:|.|||||.|.      .|.||:||:||....|.| |.||.||..|:.|||:||.:|  .|:
 Worm   250 VDVICMDHSRVKLT------DSSYIHANWVDLNSSKKA-ILTQLPLSHTASDFWQMIIDQKIKCV 307

  Fly   627 VIVMTTRVMER-GRVKCGQYWEPTEESSLEFGDYHVRT---ISVECNEDYMVASLELRNIKTDEI 687
            :::||.....: |    |....|..:..|:|.|..:|.   ..||..:.:.:..|.:.|......
 Worm   308 LLIMTDGEFNKFG----GNSVFPQNQDFLKFEDRFIRVGEFKQVELGKGWNLKVLSVSNGTYKTF 368

  Fly   688 RNVSHWQFTSWPDYGVPSSAMAMLNFLQKVREKQAQLVQG-LGDTWAGHPRGPPIVVHCSAGIGR 751
            .:|.|::  :||...:||..            ||...||. |.....||   ||:.:..| |.||
 Worm   369 IHVHHYK--NWPHGSIPSDV------------KQIWQVQSYLRKYTDGH---PPVYMSMS-GCGR 415

  Fly   752 TGTFITLDIC-ISRLEDVGTADIRGTVEKIRSQRAYSIQMPDQYVFCHLALIEYAYSRGM 810
            .|||...:.. :|...:..:.::...:|.:|:.|.:|:|...|:...:..:.|:....|:
 Worm   416 AGTFALFETAHMSLHNEQPSLNMVKCLENVRNGRLHSVQNLSQFSVVYTLIAEHVLGNGI 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptpmeg2NP_572576.1 CRAL_TRIO_N <114..144 CDD:215024
SEC14 170..314 CDD:238099
Y_phosphatase 557..803 CDD:278528 77/253 (30%)
PTPc 559..803 CDD:238006 76/251 (30%)
C46A5.1NP_501277.1 Y_phosphatase 243..468 CDD:278528 77/253 (30%)
PTPc 245..468 CDD:238006 76/251 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.