DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ptpmeg2 and ptrg-1

DIOPT Version :10

Sequence 1:NP_572576.1 Gene:Ptpmeg2 / 31907 FlyBaseID:FBgn0028341 Length:827 Species:Drosophila melanogaster
Sequence 2:NP_001255470.1 Gene:ptrg-1 / 177898 WormBaseID:WBGene00010558 Length:1159 Species:Caenorhabditis elegans


Alignment Length:257 Identity:96/257 - (37%)
Similarity:140/257 - (54%) Gaps:23/257 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   557 NLTKNRYTDVLCYDHSRVVLAHEDGDEPSDYINANFVDGYKQKNAYISTQGPLPKTSQDFWRMIW 621
            |..||||.::...:.:|:.|....|   :||||||:||...::||||:||.|||.|..|||.|||
 Worm   672 NSQKNRYNNIGAIEATRIRLNSPTG---NDYINANYVDSCNERNAYIATQAPLPSTFSDFWSMIW 733

  Fly   622 EQHCLVIVMTTRVMERGRVKCGQYWEPTEESSLEFGDYHVRTISVECNEDYMVASLELRNIKTDE 686
            ::...:||..|.::|.|:.||.|||...::|...||:|.|..:|...|..:....|:|:..|...
 Worm   734 QERSNIIVCITNMVEDGKRKCDQYWPSQQDSPQTFGNYQVTLVSESTNAHFSHRILDLKIAKAVP 798

  Fly   687 I--RNVSHWQFTSWPDYGVPSSAMAMLNFLQKVREKQAQLVQGLGDTWAGHPRGPPIVVHCSAGI 749
            .  |.|....|..|||:|||||...:|:|:....:.              |..| |:|||||||:
 Worm   799 AVERKVHQLHFMGWPDHGVPSSVFPLLSFVHYTSDI--------------HSTG-PVVVHCSAGV 848

  Fly   750 GRTGTFITLDICISRLEDVGTADIRGTVEKIRSQRAYSIQMPDQYVFCHLA---LIEYAYSR 808
            ||:|::|.:|.....|......:::|.:..:|.|||..:|..:||:|||.|   ||.:..:|
 Worm   849 GRSGSYILVDSMRRHLISFRRLNVQGHLTHMRRQRAKLVQTLEQYIFCHEAIRQLIRHGITR 910

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptpmeg2NP_572576.1 CRAL_TRIO_N <114..144 CDD:215024
SEC14 170..314 CDD:469559
PTPc-N9 529..799 CDD:350391 91/243 (37%)
ptrg-1NP_001255470.1 FN3 40..490 CDD:442628
FN3 140..232 CDD:238020
PTPc 642..900 CDD:214550 92/245 (38%)
PTP_DSP_cys 959..1148 CDD:475123
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.