DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptpmeg2 and ptp-5.1

DIOPT Version :9

Sequence 1:NP_572576.1 Gene:Ptpmeg2 / 31907 FlyBaseID:FBgn0028341 Length:827 Species:Drosophila melanogaster
Sequence 2:NP_500733.2 Gene:ptp-5.1 / 177291 WormBaseID:WBGene00016053 Length:482 Species:Caenorhabditis elegans


Alignment Length:467 Identity:88/467 - (18%)
Similarity:156/467 - (33%) Gaps:114/467 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   401 GSASGGATTAASAATEPNENITINGLSPSHRQAANNSSSSSSSAATVANPLKLNTSGSA------ 459
            |.....|:.....||:||...|.....||............::.:..|..:|......|      
 Worm    18 GKLMSTASRNGDEATKPNGTKTSKKRKPSRGNDDKGREPEPTAQSKKAKKMKPKRDSKAPSPALS 82

  Fly   460 --------DNNSTITNATTAAGAAGAAAGTTTN----------------------------GGGE 488
                    |...|:.:....|..|.:.:||.|:                            |...
 Worm    83 PGPREQLSDQKKTVEDDPPPAPIATSVSGTVTSTVNAMPAILSSEVSNKQPKEVNSMKKTKGAPN 147

  Fly   489 FWSENPPSSASSGFSDDDSLAGQEGDPKPIDQI-VQMVKQRGRHGLIKEYADIRNRAPEGTFLHA 552
            ..::.|.|..:|...:.|...|::.....:|.| :..||        |::..::....:......
 Worm   148 STTDTPVSHKTSITGNADKWVGEDVAKTWMDSIDLAEVK--------KDFEKLQTMKIDIDKDCK 204

  Fly   553 RMRANLTKNRYTDVLCYDHSRVVLAHEDGDEPSDYINANFVDGYKQKNAYISTQGPLPKTSQDFW 617
            ..:||...|:.......|.:  :|..|.|     |:|.:.|:....:|.:|. |.|:..|.:.||
 Worm   205 TWKANSKLNQSEHFPALDSN--LLKIEKG-----YVNISHVEVPLGRNVHIG-QFPVKDTEETFW 261

  Fly   618 RMIWEQHCLVIVMTTRVMERGRVKCGQYWEPTE------ESSLEFGDYHVRTISVE-CNEDYMVA 675
            :.::::....|          .|..|.  ||.|      |....:|...:....|| ..::....
 Worm   262 KAVFDKRITSI----------DVLVGD--EPIEFFPKKAEDYKNYGQMWINNRKVEHVIDEVFRF 314

  Fly   676 SLEL--RNIKTDEIRNVSHWQFTSWPDYGVP-------SSAMAMLNFLQKVREKQAQLVQGLGDT 731
            |:|:  .......|.||:  .|.:|....||       ..|:.:..||.|.              
 Worm   315 SIEVLPHGCSNSIICNVT--VFGNWKVDSVPVKQAIAIKEALGLNYFLLKT-------------- 363

  Fly   732 WAGHPRGPPIVVHCSAGIGRTGTFITLDICI----SRLEDVGTADIRGTVEKIRSQRAYSIQMPD 792
                |.....::....|.||.|.|:.|.:.:    :::.:...|||   |:.||:||..::....
 Worm   364 ----PADDNAMIISPHGAGRAGYFLALAVAVHTIDTKIAEPNIADI---VKSIRTQRPRAVDSFC 421

  Fly   793 QYVFCHLALIEY 804
            ||...:::|:.:
 Worm   422 QYCSLYISLLYF 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptpmeg2NP_572576.1 CRAL_TRIO_N <114..144 CDD:215024
SEC14 170..314 CDD:238099
Y_phosphatase 557..803 CDD:278528 57/265 (22%)
PTPc 559..803 CDD:238006 56/263 (21%)
ptp-5.1NP_500733.2 PTPc 185..432 CDD:214550 61/297 (21%)
PTPc_motif 334..432 CDD:214649 26/118 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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