DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ptpmeg2 and F47B3.1

DIOPT Version :10

Sequence 1:NP_572576.1 Gene:Ptpmeg2 / 31907 FlyBaseID:FBgn0028341 Length:827 Species:Drosophila melanogaster
Sequence 2:NP_491278.1 Gene:F47B3.1 / 171984 WormBaseID:WBGene00018525 Length:363 Species:Caenorhabditis elegans


Alignment Length:310 Identity:98/310 - (31%)
Similarity:139/310 - (44%) Gaps:59/310 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   522 VQMVKQRGRHGLIKEYADIRNRAPEGTFLHARMRANLTKNRYTDVLCYDHSRVVLAHEDGDEP-- 584
            ||.....|...|:.|:..:....|||....| ..||..||||.||.|.|..|:|:..     |  
 Worm    59 VQRTLDMGVQALVDEFRVLAKWTPEGMTTEA-FSANTDKNRYQDVPCQDKGRIVVKF-----PGL 117

  Fly   585 -SDYINANFVDGYKQKNAYISTQGPLPKTSQDFWRMIWEQHCLVIVMTTRVMERGRVKCGQYWEP 648
             ||||:||::........:|..||||..|...||.|..::....::|....:|.|::||.|||..
 Worm   118 ASDYIHANYLGTATNPKKFICAQGPLENTQHSFWAMAIQEKVECVIMLCNCIETGKIKCHQYWPL 182

  Fly   649 TEESSLEFGDYHVRTISVECNEDYMVASLELRNIKTDE---------------IRNVSHWQFTSW 698
            .:...|.||: ...|||        ||:|..:.:..||               .|.:.|.|:.:|
 Worm   183 EQGQKLVFGE-APNTIS--------VANLGAKKMAPDEQCINVTTLKVDWGQGSRTIQHLQWENW 238

  Fly   699 PDYGVPSSAMAMLNFLQKVREKQAQLVQGLGDTWAGHPRGPPIVVHCSAGIGRTGTFITLDICIS 763
            ||.|||.:.:..:|.|...|..|                 .||:||||||||||||.    :.|:
 Worm   239 PDRGVPQTNLTAINLLSATRGNQ-----------------NPILVHCSAGIGRTGTI----VAIA 282

  Fly   764 RLEDVGTAD-----IRGTVEKIRSQRAYSIQMPDQYVFCHLALIEYAYSR 808
            .::|...|.     :...::::||.|.:|||...||::.|..|:.|...|
 Worm   283 YVQDKMMAGENCMAMNELIKELRSHRPWSIQNEFQYLYLHRVLLSYFLER 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptpmeg2NP_572576.1 CRAL_TRIO_N <114..144 CDD:215024
SEC14 170..314 CDD:469559
PTPc-N9 529..799 CDD:350391 92/292 (32%)
F47B3.1NP_491278.1 Y_phosphatase 93..326 CDD:459674 85/267 (32%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.