DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptpmeg2 and Y71F9AL.4

DIOPT Version :9

Sequence 1:NP_572576.1 Gene:Ptpmeg2 / 31907 FlyBaseID:FBgn0028341 Length:827 Species:Drosophila melanogaster
Sequence 2:NP_491071.1 Gene:Y71F9AL.4 / 171861 WormBaseID:WBGene00022110 Length:557 Species:Caenorhabditis elegans


Alignment Length:450 Identity:109/450 - (24%)
Similarity:182/450 - (40%) Gaps:99/450 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   393 VSNGVGPAGSASGGATTAASAATEPNENIT----INGLSPSHRQ-AANNSSSSSSSAATVANPLK 452
            |:..:|||.:..|.:........|..::::    ....:|..|| :....::..::..:|..|  
 Worm    53 VNMKIGPANTPRGKSKPTGKKRDEKRKSVSKEEDDEKPAPLERQRSVEQIANMENTPESVLKP-- 115

  Fly   453 LNTSGSADNNSTITNATTAAGAAGAAAGTTTNGGGEFWSENPPSSASSGFSDDDSLAGQEGD--P 515
                  .|||                        |:....:...:......|||.|..::.|  |
 Worm   116 ------PDNN------------------------GKPKPSHEKDAKVKKNDDDDDLGSEKKDLEP 150

  Fly   516 KPIDQIVQMVKQRGR-------HGLIKEYADIRNRAPEG---TFLHARMRANLTKNRYTDVLCYD 570
            |..:|..:|:|:...       ..|.|||..:.|...:.   .||..:     ..|||.::.|:|
 Worm   151 KEKEQRAEMIKKWASAVMMSTPQQLTKEYKAVGNIVSDSECTAFLKFK-----DLNRYPNIQCWD 210

  Fly   571 HSRVVLAHEDGDEPSDYINANFVDGYKQKNAYISTQGPLPKTSQDFWRMIWEQHCLVIVMTTRVM 635
            ..|..||   ||| :.||:||||....:...::.||||:..|...||:|........|:|....:
 Worm   211 RGRFTLA---GDE-NFYIHANFVKICTKPERFVCTQGPMENTCTHFWQMALSLGSTSIIMLCGFV 271

  Fly   636 ERGRVKCGQYWEPTEESSLEFGDYHVRTISVECNEDYMVASLELRNIKTDEIRN----------- 689
            |.|..||.:|.... ...:...|:.|.|  ..|.|      :|:.....|:|.:           
 Worm   272 EDGSEKCAKYISDI-VGFVNLEDHRVYT--EYCTE------IEIGGKSKDKITHRVLKVVVKATG 327

  Fly   690 ----VSHWQFTSWPDYGVPSSAMAMLNFLQKVREKQAQLVQGLGDTWAGHPRGPPIVVHCSAGIG 750
                ::|:|:.||||:|:|.|....|..|..|::.:                 .|::.|||||:|
 Worm   328 QESKLNHYQWASWPDHGMPDSCDTALRLLSAVKKDK-----------------KPVIAHCSAGVG 375

  Fly   751 RTGTFITLDICISRLEDVGTADIRGTVEKIRSQRAYSIQMPDQYVFCHLALIEYAYSRGM 810
            ||||...::..|:.|......:::.:...:|..||.|:|...|||:....::|:.||:|:
 Worm   376 RTGTLALIESMIAALRHPRKQNVKDSFVLLRKDRARSVQTFPQYVYALRCVLEFLYSKGL 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptpmeg2NP_572576.1 CRAL_TRIO_N <114..144 CDD:215024
SEC14 170..314 CDD:238099
Y_phosphatase 557..803 CDD:278528 73/260 (28%)
PTPc 559..803 CDD:238006 73/258 (28%)
Y71F9AL.4NP_491071.1 PTPc 177..428 CDD:214550 79/285 (28%)
PTPc 199..428 CDD:238006 73/258 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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