DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ptpmeg2 and Ptprh

DIOPT Version :10

Sequence 1:NP_572576.1 Gene:Ptpmeg2 / 31907 FlyBaseID:FBgn0028341 Length:827 Species:Drosophila melanogaster
Sequence 2:NP_001416083.1 Gene:Ptprh / 171125 RGDID:620553 Length:1286 Species:Rattus norvegicus


Alignment Length:502 Identity:151/502 - (30%)
Similarity:223/502 - (44%) Gaps:104/502 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   347 GSGSGSAAGSAAIVSTNGT----ETEAATTAATIISAVHQLGDNNTTVVTVSNGVG-------PA 400
            |...|::...:..|..:|.    ||:..||....:        |.|:.::.|.|.|       |:
  Rat   800 GLDPGTSYECSVRVEKDGVYSTWETKNTTTVPAAV--------NITSCISTSGGYGIILTWSCPS 856

  Fly   401 GS-----ASGGATTAASAATEPNENITINGLSPSHRQAANNSSSSSSSAATVANPLKLNTSGSAD 460
            ||     ...|...::...:...:.:|:..|.|        :.|.:::..||:|.||:.::    
  Rat   857 GSYETFEVEVGRKWSSQNGSLCGKGMTVLDLEP--------AQSYTATVTTVSNSLKVQSA---- 909

  Fly   461 NNSTITNATTAAGAAGAAAGTTTNGGGEFWSENPPSSASSGFSDDDSLAG----------QEGDP 515
             .:|....:||. .|||..|....                     ..|.|          ::..|
  Rat   910 -PATCRTESTAV-IAGAIVGILLL---------------------FILVGLLIVFLKRRRKKQQP 951

  Fly   516 K--PIDQIVQ-----MVKQRGRH----------GLIKEYADIRNRAPEGTFLHARMRANLTKNRY 563
            |  |.|.:.:     :.|....|          |..:||..:.......:.:.|....|::||||
  Rat   952 KEVPKDLVFRFPGDILAKDFADHVRENEKDSNCGFAEEYQQLALEGQGQSQMTALALENVSKNRY 1016

  Fly   564 TDVLCYDHSRVVL--AHEDGDEP-SDYINANFVDGYKQKNAYISTQGPLPKTSQDFWRMIWEQHC 625
            .:||.||.|||.|  .||   || ||||||:|:.|......:|:||||||.|..|||||:|||..
  Rat  1017 RNVLPYDWSRVPLQPLHE---EPGSDYINASFMPGLWSPKEFIATQGPLPHTVSDFWRMVWEQQS 1078

  Fly   626 LVIVMTTRVMERGRVKCGQYWEPTEESSLEFGDYHVRTISVECNEDYMVASLELRNIKTDEIRNV 690
            ..:||....||.|:|||..|| |.:......|...|..:|.|..|::.|..|:|.::|..:..:|
  Rat  1079 HTLVMLANCMESGQVKCEHYW-PLDAQPCTHGQLQVTLVSEEVTENWTVRHLQLFHMKEQQTLSV 1142

  Fly   691 SHWQFTSWPDYGVPSSAMAMLNFLQKVREKQAQLVQGLGDTWAGHPRGPPIVVHCSAGIGRTGTF 755
            ..:.:.:|||:|||.|...:|.|.:.:|:...|.:.|          |||| ||||||:|||||.
  Rat  1143 RQFHYVAWPDHGVPYSPDPLLAFQKLLRQWLDQTMDG----------GPPI-VHCSAGVGRTGTL 1196

  Fly   756 ITLDICISRLEDVGTADIRGTVEKIRSQRAYSIQMPDQYVFCHLALI 802
            |.||:.:.:||..|..|....|:|:|..|...:|...||||.|..::
  Rat  1197 IALDVLLRQLECEGLVDPFSFVKKMRESRPLMVQTEAQYVFLHQCIL 1243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptpmeg2NP_572576.1 CRAL_TRIO_N <114..144 CDD:215024
SEC14 170..314 CDD:469559
PTPc-N9 529..799 CDD:350391 110/282 (39%)
PtprhNP_001416083.1 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.