DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ptpmeg2 and Ptpn23

DIOPT Version :10

Sequence 1:NP_572576.1 Gene:Ptpmeg2 / 31907 FlyBaseID:FBgn0028341 Length:827 Species:Drosophila melanogaster
Sequence 2:NP_476552.2 Gene:Ptpn23 / 117552 RGDID:619892 Length:1666 Species:Rattus norvegicus


Alignment Length:450 Identity:121/450 - (26%)
Similarity:191/450 - (42%) Gaps:82/450 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   392 TVSNGVGPAGSASGGATTAASAATEPNENITINGLSPSHRQAANNSSSSSSSAATVANPLKLNTS 456
            |::.|..|:....|...|.          ::|.|..|:::.|.:.....|.:.:....|:. :..
  Rat  1078 TLAYGPAPSPRPLGPQATP----------VSIRGPPPANQPAPSPHLVPSPAPSPGPGPVP-SRP 1131

  Fly   457 GSADNNSTITNATTAAGAAGAA-----AGTTTNGGGEFWSENPPSSASSG--------FSDD--- 505
            .:|:....:.....||....::     .||...|||:...:.....|:.|        ...|   
  Rat  1132 PTAEPPPCLRRGAAAADLLSSSPESQHGGTQPPGGGQPLLQPTKVDAAEGRRPQALRLIEQDPYE 1196

  Fly   506 ------------DSLAGQEGDPKPIDQIVQMVKQRGRHGLIKEYADIRNRAPEGTFLHARMRANL 558
                        :|..||.||...:|.:.:.:::...|       |.|.|:      .|..|...
  Rat  1197 HPERLQKLQQELESFRGQLGDAGALDAVWRELQEAQEH-------DARGRS------IAIARCYS 1248

  Fly   559 TKNRYTDVLCYDHSRVVLAHEDGDEPSDYINANFVDGYKQKNAY----ISTQGPLPKTSQDFWRM 619
            .|||:.||:.||.:||||  ..|.:  |||||:.|:|.   :.|    ::||.|||.|:.|||.|
  Rat  1249 LKNRHQDVMPYDSNRVVL--RSGKD--DYINASCVEGL---SPYCPPLVATQAPLPGTAADFWLM 1306

  Fly   620 IWEQHCLVIVMTTRVMERGRVKCGQYWEPTEESSLEFGDYHVRTISVECNEDYM--VASLELR-- 680
            :.||...||||.....|..:.|..:|:.......:..|...|...||...:.::  |.||:.|  
  Rat  1307 VHEQKVSVIVMLVSEAEMEKQKVARYFPIERGQPMVHGALSVALSSVRTTDTHVERVLSLQFRDQ 1371

  Fly   681 NIKTDEIRNVSHWQFTSWPDYGVPSSAMAMLNFLQKVREKQAQLVQGLGDTWAGHPRGPPIVVHC 745
            ::|    |::.|..|.:||:.|:|.|...:|.|:|:|......          ..|...||||||
  Rat  1372 SLK----RSLVHLHFPTWPELGLPDSPGNLLRFIQEVHAHYLH----------QRPLHTPIVVHC 1422

  Fly   746 SAGIGRTGTFITLDICISRLE-DVGTADIRGTVEKIRSQRAYSIQMPDQYVFCHLALIEY 804
            |:|:||||.|..|...:..:| ..|..::...|.::|.||.:.:|......|||.||:.:
  Rat  1423 SSGVGRTGAFALLYAAVQEVEAGSGIPELPQLVRRMRQQRKHMLQEKLHLKFCHEALVRH 1482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptpmeg2NP_572576.1 CRAL_TRIO_N <114..144 CDD:215024
SEC14 170..314 CDD:469559
PTPc-N9 529..799 CDD:350391 90/278 (32%)
Ptpn23NP_476552.2 BRO1_HD-PTP_like 2..357 CDD:185762
V_HD-PTP_like 362..702 CDD:185747
PHA03247 <734..1147 CDD:223021 12/79 (15%)
PTP-N23 1273..1477 CDD:350387 71/220 (32%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.