DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ptpmeg2 and Ptpru

DIOPT Version :10

Sequence 1:NP_572576.1 Gene:Ptpmeg2 / 31907 FlyBaseID:FBgn0028341 Length:827 Species:Drosophila melanogaster
Sequence 2:XP_017448609.1 Gene:Ptpru / 116680 RGDID:620782 Length:1452 Species:Rattus norvegicus


Alignment Length:1028 Identity:228/1028 - (22%)
Similarity:353/1028 - (34%) Gaps:373/1028 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 SGSRSEQDSGCHRRLFLCIAKAVKQFIDLCNNLGA---NCSTTTATSPSTSSSSASSTQNLIAVV 79
            |..|||||      |:.|:::|.:         ||   |.:......|.|            .:.
  Rat   253 SVGRSEQD------LYRCVSQAPR---------GAGVSNFAELIVKEPPT------------PIA 290

  Fly    80 PPQLQQ-----LQVQLPAPGGGGGAGAGGGGGGGGGAAPVRRHISHTTAVKFLYARKFDIPRAVS 139
            ||||.:     |.:||     ...:..|.|        |:.|     ..:::..||.   |.|  
  Rat   291 PPQLLRAGPTYLIIQL-----NTNSIIGDG--------PIVR-----KEIEYRMARG---PWA-- 332

  Fly   140 LYEQHEQIRLKEY-LYNIDPDVE--------------------PLRSELQTGKFTILPARTSSGA 183
              |.| .:.|:.| |:::|||.|                    ||.|..:..:    |.|...|.
  Rat   333 --EVH-AVNLQTYKLWHLDPDTEYEISVLLTRPGDGGTGRPGPPLLSRTKCAE----PTRAPKGL 390

  Fly   184 AIALFTAN----RHSPLSVSHTTTLQGIVYQLDSALQDSETQRAGLVFIYDMSGSKYSNFDYDLS 244
            |.|...|.    :..||..:.|.               ..|....|.:.|.:.||.....     
  Rat   391 AFAEIQARQLTLQWEPLGYNVTR---------------CHTYAVSLCYHYTLGGSHNQTI----- 435

  Fly   245 QKILTLLKGGYPARLKKV---------LIVTAP-------------------------------- 268
            ::.:.:.:|.....:|.:         ||:|.|                                
  Rat   436 RECVKMERGASRYTIKNLLPFRNVHVRLILTNPEGRKEGKEVTFQTDEDVPGGIAAESLTFTPLE 500

  Fly   269 ----LWFKAPFKILRLFVREKLRERVFTVSVPQLALHVPRKAL------PIHLGGTLEVDHATWL 323
                |.::.|.:...|..:.::..:....|.|.:.:..||:.:      ..|:...|: ...|:|
  Rat   501 DMIFLKWEEPQEPNGLITQYEISYQSIESSDPAVNVPGPRRTISKLRNETYHVFSNLQ-PGTTYL 564

  Fly   324 LSCRQSMTNREDELLANIVGVGGGSGSGSAAGSAAIVSTNGTETEAATTAATIISA--------V 380
            .|.| :.|::               |.|.|               |.|...|.|||        .
  Rat   565 FSVR-ARTSK---------------GFGQA---------------ALTEITTNISAPSFDYADMP 598

  Fly   381 HQLGDNNTTVVTV---SNGVG---------------------PAGS-------------ASG--- 405
            ..||::..|:..:   :.|.|                     |.|.             |.|   
  Rat   599 SPLGESENTITVLLRPAQGRGAPISVYQVVVEEERPRRLRREPGGQDCFSVPLTFETALARGLVH 663

  Fly   406 --GATTAASAATEP-----NENITING-----LSPS-----HRQAAN--------NSSSSSSSAA 445
              ||..|||:..|.     .:|.|..|     |.|.     :.|||:        |....:..||
  Rat   664 YFGAELAASSLLEAMPFTVGDNQTYRGFWNPPLEPRKAYLIYFQAASHLKGETRLNCIRIARKAA 728

  Fly   446 TVANPLKLNTSGSADNNSTITNATTAAGAA------GAAAGTTTNGGGEF---WSENPPSSA--- 498
            ...:...|..|..::....|. ...|.|.|      ||.......|...:   :...|.:.|   
  Rat   729 CKESKRPLEVSQRSEEMGLIL-GICAGGLAVLILLLGAIIIIIRKGRDRYAYSYYPKPVNMAKAT 792

  Fly   499 -----------------------------------------------SSGFSDDDSL-------- 508
                                                           |||.::..||        
  Rat   793 VNYRQEKTHMMTAVDRSFTDQSTLQEDERLGLSFMDAPGYSPRGDQRSSGVTEASSLLGGSPRRP 857

  Fly   509 AGQEGDPKPIDQI------------VQMVKQRGRHGLIKEYADIRNRAPEGTFLHARMRANLTKN 561
            .|::|.|....|:            :..:|....:|..:||....    || :...:.:..|...
  Rat   858 CGRKGSPYHTGQLHPAVRVADLLQHINQMKTAEGYGFKQEYESFF----EG-WDATKKKDKLKSG 917

  Fly   562 RYTDVLCYDHSRVVLAHEDGDEPSDYINANFVD------GYKQKNAYISTQGPLPKTSQDFWRMI 620
            |...|..||..||.|....||..:|||:||::|      ||.:.|.:|:||||.|:...|||||:
  Rat   918 RQEPVSAYDRHRVKLHPMLGDPDADYISANYIDIRINRQGYHRSNHFIATQGPKPEMIYDFWRMV 982

  Fly   621 WEQHCLVIVMTTRVMERGRVKCGQYWEPTEESSLEFGDYHVRTISVECNEDYMVASLELRNIKTD 685
            |::.|:.:||.::::|.|||||.:||  .|:|.: :||..:..:..|...:|:|.:..|......
  Rat   983 WQEQCVSVVMISKLVEVGRVKCSRYW--PEDSDM-YGDIKITLVKTETLAEYVVRTFALERRGYS 1044

  Fly   686 EIRNVSHWQFTSWPDYGVPSSAMAMLNFLQKVREKQAQLVQGLGDTWAGHPRGPPIVVHCSAGIG 750
            ....|..:.||:||::|||..|..:|.|:::|:....             |...|:|:|||||.|
  Rat  1045 ARHEVRQFHFTAWPEHGVPYHATGLLAFIRRVKASTP-------------PDAGPVVIHCSAGTG 1096

  Fly   751 RTGTFITLDICISRLEDVGTADIRGTVEKIRSQRAYSIQMPDQYVFCHLALIE 803
            |||.:|.||:.:...|..|..||...|:.:.|:|...||..:||:|.|.|::|
  Rat  1097 RTGCYIVLDVMLDMAECEGVVDIYNCVKTLCSRRVNMIQTEEQYIFIHDAILE 1149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptpmeg2NP_572576.1 CRAL_TRIO_N <114..144 CDD:215024 6/29 (21%)
SEC14 170..314 CDD:469559 28/198 (14%)
PTPc-N9 529..799 CDD:350391 94/275 (34%)
PtpruXP_017448609.1 MAM 22..186 CDD:214533
fn3 291..365 CDD:394996 24/99 (24%)
FN3 <347..>624 CDD:442628 55/332 (17%)
fn3 494..577 CDD:394996 15/99 (15%)
PTP_DSP_cys 943..1153 CDD:475123 81/223 (36%)
R-PTPc-U-2 1238..1444 CDD:350485
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.