DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptpmeg2 and ptprt

DIOPT Version :10

Sequence 1:NP_572576.1 Gene:Ptpmeg2 / 31907 FlyBaseID:FBgn0028341 Length:827 Species:Drosophila melanogaster
Sequence 2:XP_004918595.1 Gene:ptprt / 100496210 XenbaseID:XB-GENE-5717729 Length:1486 Species:Xenopus tropicalis


Alignment Length:915 Identity:235/915 - (25%)
Similarity:354/915 - (38%) Gaps:221/915 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 STSSSSASS------TQNLIAVVPPQLQQLQVQLPAPGGGGGAGAGGGGGGGGG---------AA 112
            :||.|.|.:      |..|..:.|....:::|.|..|        |.||.|..|         |.
 Frog   320 TTSGSWAETHVMDGPTYKLWHLDPDVEYEIRVLLTRP--------GEGGTGPPGPPLTTRTKCAD 376

  Fly   113 PVRRHISHTTAVKFLYARKFDI---PRAVSLYEQHEQIRLKEYLYNIDPD-VEPLRSELQTGKFT 173
            ||  |......:..:.||:..:   |...|:...|.......|.:.:..| ||.....|.:..:|
 Frog   377 PV--HGPQNVELVDIRARQLTLQWEPFGYSVTRCHSYNLTLHYSFQLGEDRVEAEELVLTSSHYT 439

  Fly   174 ILPARTSSGAAIALFTAN----RHSPLSVSHT----------TTLQGIVYQLDSALQ---DSETQ 221
            :...|..:...:.|...|    :.|...|.||          .::||..::....||   .:||.
 Frog   440 LRGLRPHTAVYLRLALCNPEGRKESGEIVVHTEEDVPGPIPLESIQGGPFEEKIYLQWKAPNETN 504

  Fly   222 RAGLVFIY--------------DMSGSK-----------------YSNFDYDLSQKILTLLKGGY 255
              |::.:|              |:|..|                 |....|..:.:..|....|.
 Frog   505 --GVISMYEVTYKAVGSLDPSADLSNQKGRIFKLRNETHHLFVGLYPGSTYSFTIRASTSKGFGP 567

  Fly   256 PARLKKVLIVTAP-------------------LWFK------APFKILRLFVREKLRERVFTVSV 295
            |...:....:.||                   :|.|      ||....:|.|:|:..:|....:.
 Frog   568 PVTARIATKIAAPSLTDSEAEAPLNETESTITVWLKPAQSRGAPVSAYQLVVKEERAQRSGRAAD 632

  Fly   296 PQLALHVP---RKALPIHLGGTLEVDH--ATWL----LSCRQSMT---NREDELLANIVGVGGGS 348
            ......||   |.|      .:||..|  |..|    |:..|..|   ||...        |..:
 Frog   633 GSGCFPVPVGYRNA------SSLESSHYFAAELKPSQLAVTQPFTVGDNRTYN--------GYWN 683

  Fly   349 GSGSAAGSAAI----VSTNGTETE--------AATTAATIISAVHQLGDNNTTVVTV-SNGVGPA 400
            ...|...|.:|    :||...||:        .|.||..:....|......|...|: ||.|.|.
 Frog   684 PPLSPVKSYSIYFQALSTANGETKIGCVRLASKAATAGLLPITRHPPSQPVTGASTLNSNTVEPE 748

  Fly   401 GSASGGATTAASAATEPNENITINGLSPSHRQAAN----------------NSSSSSSSAATVAN 449
            ..|.....||...|......|.:.|...:.::..|                ..|.|......||:
 Frog   749 KPADSTVQTAGVIAGMLMFIIILLGAMMTIKRRRNVYSYSYYLKLAKKQKETQSGSQREMGLVAS 813

  Fly   450 PLKLNTSGSADNNSTITNATTAAGAAGAAAGTTTNGGGEFWSENPPSSASSGFSD--------DD 506
            ....:...|..|..|.::.....|.:.::..:.:........::..||..|..||        |:
 Frog   814 DKSSSKLSSTRNEDTFSSCQDVNGFSSSSPCSFSVQSKNIQGKSLLSSCYSVSSDTVPSLALLDN 878

  Fly   507 S-----------------------LAGQEGDPKP-------IDQIVQMVKQRGRHGLIKEYADIR 541
            |                       :|...|..:|       :..|.||.:.:| :|..:||..: 
 Frog   879 SHVDMNQPTLTIQTHPYRTCEPLEMAYPRGQLQPAIRVADLLQHITQMKRGQG-YGFKEEYEAL- 941

  Fly   542 NRAPEG---TFLHARMRANLTKNRYTDVLCYDHSRVVLAHEDGDEPSDYINANFVDGYKQKNAYI 603
               |||   ::..|:...|..||||.:::.||||||.|...:||..|||||||:||||.:...||
 Frog   942 ---PEGQTASWDTAKEDENRNKNRYGNIISYDHSRVRLQQIEGDPHSDYINANYVDGYHRPRYYI 1003

  Fly   604 STQGPLPKTSQDFWRMIWEQHCLVIVMTTRVMERGRVKCGQYWEPTEESSLEFGDYHVRTISVEC 668
            :||||:.:|.:|||||||:::.:.:||.|.::|.|||||.:||....|   .:||..|..|..|.
 Frog  1004 ATQGPMQETVKDFWRMIWQENSVSVVMVTNLVEVGRVKCVRYWPDETE---VYGDIKVSLIETEP 1065

  Fly   669 NEDYMVASLELRNIKTDEIRNVSHWQFTSWPDYGVPSSAMAMLNFLQKVREKQAQLVQGLGDTWA 733
            ..:|::.:..::...:.:||.:..:.||||||:|||..|..:|.|:::|:             :.
 Frog  1066 LAEYVIRTFTVQKKGSHDIREIRQFHFTSWPDHGVPCYATGLLGFIRQVK-------------FL 1117

  Fly   734 GHPRGPPIVVHCSAGIGRTGTFITLDICISRLEDVGTADIRGTVEKIRSQRAYSIQMPDQYVFCH 798
            ..|...||.||||||.||||..|.:||.:...|:.|..||...|.::|:||...:|..:||||.|
 Frog  1118 NPPDAGPITVHCSAGAGRTGCLIAIDIMLDMAENEGVVDIFNCVRELRAQRVNMVQTEEQYVFVH 1182

  Fly   799 LALIE 803
            .|::|
 Frog  1183 DAILE 1187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptpmeg2NP_572576.1 CRAL_TRIO_N <114..144 CDD:215024 6/32 (19%)
SEC14 170..314 CDD:469559 38/219 (17%)
PTPc-N9 529..799 CDD:350391 109/272 (40%)
ptprtXP_004918595.1 MAM 21..180 CDD:214533
Ig 187..272 CDD:472250
FN3 280..351 CDD:214495 7/30 (23%)
FN3 381..471 CDD:238020 16/89 (18%)
fn3 493..568 CDD:394996 13/76 (17%)
R-PTPc-T-1 955..1191 CDD:350478 104/249 (42%)
R-PTPc-T-2 1276..1481 CDD:350482
Blue background indicates that the domain is not in the aligned region.

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