DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31975 and nhr-246

DIOPT Version :9

Sequence 1:NP_001162840.1 Gene:CG31975 / 319052 FlyBaseID:FBgn0051975 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_001256661.1 Gene:nhr-246 / 191499 WormBaseID:WBGene00014192 Length:386 Species:Caenorhabditis elegans


Alignment Length:465 Identity:86/465 - (18%)
Similarity:148/465 - (31%) Gaps:146/465 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VDKLPEIRA-LSEVVE------PHVSGSRLLNYHTSSLTKPGDNYGSVLLAIHARLQKSNGESFE 60
            ::.:|..:. |:|::|      |.:....:|.         ....|.:.|....||...| :...
 Worm     6 IENIPLTKEWLAELIEIKIGVKPKIGTVGILE---------NSELGFMSLLRKVRLHFDN-DDLP 60

  Fly    61 EQLVAKVPPIDPKYWQFFQPEQTC-LTENAVYKILAPALATLQDEAGVP--DESQFKGFP----- 117
            :.:|.|:|          |..:.| :.|||              ..||.  |.|..:.|.     
 Worm    61 KHVVLKIP----------QNTKGCSVVENA--------------GGGVKNVDHSVVERFMHNTEC 101

  Fly   118 RFYGCRESLESN---------SSKVDQNA---VLVLENLRS-------SGYVSGQRLKAFDLAHT 163
            .:|....||...         :||..:.|   |:|||.|..       .|:...|..|..|    
 Worm   102 NYYKLFSSLSEKPLQIPTTYLASKAGEKAPVPVIVLEMLEDCKLHDLIPGFNEDQLFKIVD---- 162

  Fly   164 LLALKYMAEFHALSLALRILRPEVFREQVRPFFKKFDWHAEAPEWKSVMKAET-----------L 217
                 .:.:.|..||.                         ..:||.::..|:           :
 Worm   163 -----ELVKLHIFSLT-------------------------TEKWKEIVPDESKLAMSGFLQCMV 197

  Fly   218 EDIRR--ATNNDSRLVAR------------MKELSDQFFEFLAAAPDRPDGPFTSIIHCDFWINN 268
            .|:.|  |.|.:..::..            ::::.|::..     .:||    :.|.|.|.|...
 Worm   198 ADVGRKLAQNPELGVILSYVENTLDTDPNYLQKMRDEYIN-----EERP----SVICHGDLWAPQ 253

  Fly   269 IMF--RYGPTGTPVELKIIDFQTAQYDSVVHDIISFLLSSVDTAILEVEFEHMLEAYYEAFERCL 331
            |::  .....|      |:|:|.....|.:.|:...|.:.......:...:.:|:.||...:..|
 Worm   254 ILWDKEDNIAG------IVDWQATHRGSPMEDLHHILSTCTSVQNRKTFTKPLLDHYYNKLKVGL 312

  Fly   332 RRVGAKLEVHTFKEFRLEVKRVAYIQVPHAIFMTRFILADSALIGDSEAE-ERPKLTDVLKNTGS 395
            :..|.| ...|.:|..:|............||...|......|..|.:.: ||.|.:.|...:..
 Worm   313 KEKGFK-TTWTREEIDIEYNYSFIYGASRTIFANGFWANSPVLQTDGKPDPERIKESFVRCKSYL 376

  Fly   396 ERISRKLSQI 405
            |...|:|:.|
 Worm   377 EDTIRELNII 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31975NP_001162840.1 EcKinase 36..335 CDD:281023 62/352 (18%)
APH <214..329 CDD:279908 23/141 (16%)
nhr-246NP_001256661.1 CHK 134..314 CDD:214734 38/228 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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