DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hecw and ube3c

DIOPT Version :10

Sequence 1:NP_572574.2 Gene:Hecw / 31905 FlyBaseID:FBgn0261931 Length:1426 Species:Drosophila melanogaster
Sequence 2:NP_001072518.1 Gene:ube3c / 779973 XenbaseID:XB-GENE-1011935 Length:1082 Species:Xenopus tropicalis


Alignment Length:534 Identity:157/534 - (29%)
Similarity:252/534 - (47%) Gaps:64/534 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   922 RSAYGAAGMASAGATAAGYEDVPIAYNEK--VIAFLRQPNILEILRERQGQ-------HTMSRQL 977
            |..|.|| ..|.|.|........|...:|  :..|....|::::|:.|..:       |.:|.|.
 Frog   568 REEYMAA-FRSIGVTTNAEMQKQIQAEQKRWIQLFKVITNLVKMLKSRDARRNFCPFNHWLSEQE 631

  Fly   978 REKINILRVEGVPA------LERLGH--DLQLTILLSLFEQEIMGFVPIEERSPQGSPVLNSRMP 1034
            ..|.:.:....||:      :.|:|.  .||.|:.:.|                :.:|:..|...
 Frog   632 NIKADKVTQLYVPSARHVWRVRRMGRIGPLQSTLDVGL----------------EPAPLSVSEER 680

  Fly  1035 QRA---PPPFRRDFEAKLRSFYR-----KLESKGYGQGPHKLKLHIRRSHLLEDAFRRIMSANKK 1091
            |.|   ..||...||.:::.|.|     |.|.:|.|.....:.:.|||:::.|||:.::...|:.
 Frog   681 QLAILTELPFVVPFEERVKIFQRLIYADKQEVQGDGPFIDGINVTIRRNYIYEDAYDKLSPENEP 745

  Fly  1092 DLQRGRLAVLWDT----EEGLDYGGPSREFFFLLSRELFNPYYGLFEYSANDTYTVQVSPLSAFV 1152
            ||::.....|.:|    |.|:|.||..|||...|.:..|||..|.|: :.|:. .:..:|.:..:
 Frog   746 DLKKRIRVHLLNTHGLDEAGIDGGGIFREFLNELLKSGFNPNQGFFK-TTNEG-LLYPNPAAQML 808

  Fly  1153 --DNCHDWFRFSGRVLGLALVHQYLLDAFFTRPFYKALL--RLPVALSDLESLDNEFHQSLQWIR 1213
              |:....:.|.||:||.||....|::..|...|...||  ...|.:..|.|||.|.:::|.:::
 Frog   809 VGDSFARHYYFLGRMLGKALYENMLVELPFASFFLSKLLGTSADVDIHHLASLDPEMYRNLLFLK 873

  Fly  1214 --DNDIGTGVDLGLTFCVTEELLGSVVDRELKPGGKNIIINEKNKKEYLERMIKWRLERGVQEQT 1276
              ::|:   .:|||.|.|....||.....|||.|||:|.:...|:..|:..:..:||.:.::...
 Frog   874 SYEDDV---EELGLNFTVVNNDLGEAQVVELKAGGKDIPVTSANRIAYIHLVADYRLNKQIRPHC 935

  Fly  1277 ESLVRGFYEVIDSRLVSVFDARELELVIAGT-AEIDTNDWRLNTEYRSGYHDNHQVIVWFWQVIE 1340
            .:..:|...|::...:.:||.:||:::|:|. ..|..:|.:..|.|..||..:|.||..||:|:|
 Frog   936 LAFRQGLANVVNLEWLRMFDQQELQVLISGAQVPICLDDLKSFTNYSGGYSADHAVIKIFWRVVE 1000

  Fly  1341 RFSNEQRLRLLQFVTGTSSIPYEGFSALRGSTGPRRFCIEKWGKP-NALPRAHTCFNRLDLPPYP 1404
            .|::|::.:||:|||..|..|..||..|..:     |||...|.. ..||.|.||.|.|.||.:.
 Frog  1001 NFTDEEKRKLLKFVTSCSRPPLLGFKELYPA-----FCIHNGGSDLERLPTASTCMNLLKLPEFY 1060

  Fly  1405 TPELLYEKLLLAVE 1418
            ...|:..|||.|:|
 Frog  1061 DEHLMKSKLLYAIE 1074

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HecwNP_572574.2 PHA03247 <411..562 CDD:223021
WW 638..667 CDD:459800
HECW1_helix 738..794 CDD:465766
HECTc 1068..1424 CDD:238033 118/363 (33%)
ube3cNP_001072518.1 IQ 47..64 CDD:197470
HECTc 724..1080 CDD:238033 118/361 (33%)
Blue background indicates that the domain is not in the aligned region.

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