DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42797 and nedd4a

DIOPT Version :9

Sequence 1:NP_572574.2 Gene:CG42797 / 31905 FlyBaseID:FBgn0261931 Length:1426 Species:Drosophila melanogaster
Sequence 2:NP_001029358.1 Gene:nedd4a / 619412 ZFINID:ZDB-GENE-051005-2 Length:910 Species:Danio rerio


Alignment Length:814 Identity:281/814 - (34%)
Similarity:407/814 - (50%) Gaps:118/814 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   636 PPLPPAWEARMDSHGRIFYIDHTTRTTSWQRPGAAPSGGPAGREQHHRQQLDRRYQS---IRRTI 697
            |.|||.||.|.|:.||.:|::|.:|||.|.||....|    .|:...||:.....|.   .||.|
Zfish   192 PALPPGWEERQDNLGRTYYVNHESRTTQWHRPTIQDS----QRDNEQRQETHSESQRAFLTRRQI 252

  Fly   698 T----NESR--AAQLYNLPTSANSNANSTAPAAPPPATAIHPAILMLCRPDFYSLLHTNEAALAI 756
            :    |..|  :.:.:.:.|:..|...|:.....||.......|...|. :|..|..||:...::
Zfish   253 SEHEENHERRESPESWEIITADESTLYSSLSERSPPPPHSPMEISTFCE-EFNRLQATNDRRTSL 316

  Fly   757 YNRNAALKHMVMRIRRDPPCFQRYQYNKDLVALVNTFAQMSRELPSCWETKLDQSGKQFFIDHQH 821
            ..:..|....|     |.|...|      .:...::....|..||..||.|.|..|:.:|::|..
Zfish   317 TPQVTAAAEEV-----DRPSRWR------SILFTHSLLPTSAGLPPGWEEKQDSKGRIYFVNHNS 370

  Fly   822 RRTSFMDPRL-----PVECPRVVRHRQQHSQQQSSVGYYY-PDLVDGNCLSATSGHINASPASSV 880
            |.|::..|.:     |.|.|.........|..|::.||.. ||:...:..:.|..|....|....
Zfish   371 RTTTWTRPLIQLIQPPSESPASPMASGSTSLSQNAAGYALPPDVSPQHTHTHTHTHTPEHPGLMP 435

  Fly   881 SG--VPPLPPPRPSSSSSSSRSSHGHGHNCNTTS----AISCALNADRSAYGAAGMASAGATAAG 939
            :|  |...|..||....          ||..||:    .:...:...|       ..|...|..|
Zfish   436 TGWEVRSAPSGRPFFID----------HNTKTTTWDDPRLKVPVQMRR-------RVSLDPTDLG 483

  Fly   940 YEDVPIAYNEKVIAFLRQPNILEILRERQGQHTMSRQLREKINILRVEGVPALERLGHDLQLTIL 1004
              .:|..:..:.|.......::...:...|:                         .||.::   
Zfish   484 --PLPPGWESECIVMAESSTLITTQKPHNGK-------------------------THDYRI--- 518

  Fly  1005 LSLFEQEIMGFVPIEERSPQGSPVLNSRMPQRAPPPFRRDFEAKLRSFYRKLESKGYGQGPHKLK 1069
                             .|...|.:          |:.||::.|...|.:||  |...:.|::.:
Zfish   519 -----------------QPSLGPAV----------PYSRDYKQKYEYFRKKL--KKPAEIPNRFE 554

  Fly  1070 LHIRRSHLLEDAFRRIMSANKKDLQRGRLAVLWDTEEGLDYGGPSREFFFLLSRELFNPYYGLFE 1134
            |.:||:.:|||::|||:|..:.:|.:.||.|.::.|:||||||.:||:|||:|:|:|||||||||
Zfish   555 LSVRRNAVLEDSYRRILSVKRSELLKARLWVEFEGEKGLDYGGVAREWFFLISKEMFNPYYGLFE 619

  Fly  1135 YSANDTYTVQVSPLSAFVDNCH-DWFRFSGRVLGLALVHQYLLDAFFTRPFYKALLRLPVALSDL 1198
            |||.|.||:|::|.|...:..| .:|:|.|||.|:|:.|..||||||.|||||.:|:.|:.|.|:
Zfish   620 YSATDNYTLQINPNSGLCNEDHLSYFKFIGRVAGMAVYHGKLLDAFFIRPFYKMMLQKPITLQDM 684

  Fly  1199 ESLDNEFHQSLQWIRDNDIGTGVDLGLTFCVTEELLGSVVDRELKPGGKNIIINEKNKKEYLERM 1263
            ||:|:|:..||:||.:||   ..||.|.|.:.|||.|.....||||||.:|::|:.|||||:..:
Zfish   685 ESVDSEYFNSLRWILEND---PTDLDLRFTIDEELFGQTHQHELKPGGADIVVNDTNKKEYIHLV 746

  Fly  1264 IKWRLERGVQEQTESLVRGFYEVIDSRLVSVFDARELELVIAGTAEIDTNDWRLNTEYRSGYHDN 1328
            ::||....:|.|..:...||||:|...|:.:||..||||::.|..::|.||||.||:|::||:.|
Zfish   747 MQWRFVDRIQRQMTAFKEGFYELIPQDLIKIFDENELELLMCGLGDVDVNDWRENTKYKNGYNPN 811

  Fly  1329 HQVIVWFWQVIERFSNEQRLRLLQFVTGTSSIPYEGFSALRGSTGPRRFCIEKWGKPNALPRAHT 1393
            |..|:|||:.:.....|:|:||||||||||.:|..||:.|.||.||:.|.||:||....||||||
Zfish   812 HPAIIWFWKTVLLMDAEKRIRLLQFVTGTSRVPMNGFAELYGSNGPQLFTIEQWGTREKLPRAHT 876

  Fly  1394 CFNRLDLPPYPTPELLYEKLLLAVEETNTF-GIE 1426
            |||||||||..:.|.|.|||.:|:|....| |::
Zfish   877 CFNRLDLPPXESFEELREKLHMAIENAQGFDGVD 910

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42797NP_572574.2 WW 638..667 CDD:278809 15/28 (54%)
HECTc 1068..1424 CDD:238033 182/357 (51%)
HECTc 1092..1423 CDD:214523 171/331 (52%)
nedd4aNP_001029358.1 C2_NEDD4_NEDD4L 22..153 CDD:175999
WW 194..223 CDD:366073 15/28 (54%)
WW 349..378 CDD:366073 11/28 (39%)
WW 435..465 CDD:238122 9/39 (23%)
HECTc 577..906 CDD:214523 171/331 (52%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000080
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

Return to query results.
Submit another query.