DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42797 and hyd

DIOPT Version :9

Sequence 1:NP_572574.2 Gene:CG42797 / 31905 FlyBaseID:FBgn0261931 Length:1426 Species:Drosophila melanogaster
Sequence 2:NP_001287262.1 Gene:hyd / 41181 FlyBaseID:FBgn0002431 Length:2887 Species:Drosophila melanogaster


Alignment Length:1654 Identity:317/1654 - (19%)
Similarity:551/1654 - (33%) Gaps:545/1654 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 APV------PLQPLAASSACLADRS-----PVDPIA----------------------------- 30
            |||      |..|...||:.|..|:     .|||:|                             
  Fly  1542 APVRLGVVRPTAPFTMSSSNLDVRNSDDLFSVDPLAPSNVESPSEQILVHDAGNDQSANFNIQQN 1606

  Fly    31 --------VR--------LQQEEQAEGDDEE--EEEEEED--DDDDPKEEEAFYEARNGNESD-- 73
                    :|        :.:|..:...|:|  |.:..||  .||:...:..|.:|...::||  
  Fly  1607 YDVVAMETIRDASESEEVINREANSHNQDDELIENQRNEDGMQDDESDNDFTFNDAETESDSDDN 1671

  Fly    74 ----ELEQAFQSALTLTNDVHVSVSEVEEHEPPLASRNQEVAEVEE----------QQQQLGACA 124
                |::::.|:..|:.::..:.|..:|:.....:::.::.:|..|          .:|||...:
  Fly  1672 QSNQEVQRSVQAGATVGSENDIGVLFLEDESGDSSAQEEDGSEDGESDDQSDEFNFNEQQLERRS 1736

  Fly   125 LPQPSEASLTGSKETREPRHHQTLLSTKSCETPANNATLSPTNSYNGSIGSDGGSSVGGGARRKS 189
            ....:.:.|.........|...|..|:....|.:|...:.|.                  |.|:|
  Fly  1737 TNSNARSDLAPQTMQWAIRSRDTARSSVRVPTGSNMVFIDPM------------------ALRRS 1783

  Fly   190 WTLSPQSGGSTPLSGAKKKTKTGAPTTTLSN-ANGDGFNLWVARECFETVPAEMVDTLSMAEVDE 253
             |:...:..:||      ..:.....||.|| |...|..:   |:..|.:.....:.|:..|...
  Fly  1784 -TVPASTTVTTP------SIEPHTMATTASNLARAFGITI---RQISELISILSYNVLNDIETSL 1838

  Fly   254 EVDEEEDEEAAAVESLL----------------GAAAALQASAHVQRRQQQQHHQHLRQPSPPQH 302
            ::   :::||.||::.:                |..|.|:..|::         .:...|:.|.|
  Fly  1839 KI---QNDEAIAVQAFVEKRLKATWDWMFTVMDGTEAQLKFGAYL---------TNYTDPNHPLH 1891

  Fly   303 RPLERSWPPRAVGRDLKLQGDVFQFDILDTDERLAEEMAQGSGSSNNSPLATPPVRFKPLLKKKI 367
             ||..|                                ||.|.|...:|..:..|....::....
  Fly  1892 -PLNLS--------------------------------AQASSSQTPAPATSSSVNGVNIMGSNS 1923

  Fly   368 GPDSYINTISTQK---------VPV-------HQSYEFPTFPSSSAVGSS--------SSSPNSL 408
            ..|.:...:|..:         :||       |.:|....|.......|.        |...|:|
  Fly  1924 RRDFFTYCLSLMRSHTSEHRDALPVLDITALRHIAYVLDAFVYYMRNDSGFYDKQDTISGRINNL 1988

  Fly   409 QFPYLRQHRPLTRALSNGKASSSEEQASPRLLLSPKRPRSPPSGCS--------TRSASPLDISL 465
            .        |:|.:.......::.|:.:..:.:|..   |.|||..        .||.|.|.:..
  Fly  1989 S--------PMTESYDTDDELANLEEFNADVQMSAS---SMPSGSQGTRRHAFFARSESTLSLGC 2042

  Fly   466 S-PEQHSPTRGRGVGGALQDAVPPGTPTFHGQRP---QQRLLKRV-----GGGAGAGATGGATGS 521
            | ||        |....|..|:|..... |..:|   :|.|...:     .....:|||....|.
  Fly  2043 SAPE--------GFELPLDMAMPLADKP-HLLQPNSKRQELFANLPLLVTTNANNSGATNDGDGG 2098

  Fly   522 PLVCPPTPT-----HHARRHARL-QAVTANSSLASGGAIPSDPPAVSSQLDYIYLQDGGQEQG-- 578
            . :...|||     :..:|:.|: :.|..:||....|.:.:.....:....|:.|:   ::||  
  Fly  2099 S-IFDYTPTRLGFSNSLKRNERVYETVPIDSSKTGDGNVTNKAEGSTDSNIYVQLK---KKQGSD 2159

  Fly   579 -----------QEQSDEVVHISSTRLPSIPERSAAAAAAAAAAAAGAALMEPGTGTVSGSSGAGA 632
                       |.:.::||.:.:.  .|:|  |.:.:..|..|.....::.|...:||.::.|  
  Fly  2160 DFKSHKEADGNQSKYEKVVLMETD--DSLP--STSKSTEALMATRPEVIIAPNKASVSPATAA-- 2218

  Fly   633 AGEPPLPPAWEARMDSHGRIFYIDHTTRTTSWQRPGAAPSGGPAGREQHHRQQLDRRYQSIRRTI 697
                                             |.....:||                 |..:||
  Fly  2219 ---------------------------------RSVIVLAGG-----------------SCLKTI 2233

  Fly   698 TNESRAAQLYNLPTSANSNANSTAPAAPPPATAIHPAILMLCRPDFYSLLHTNEAALAIYNRNAA 762
            .::.......||.|:..:..::.                                    |.::.:
  Fly  2234 DSDINNYSASNLSTAEQAKCDTQ------------------------------------YQKSTS 2262

  Fly   763 LKHMVMRIRRDPPCFQRYQYNKDLVALVNTFAQMSRELPSC------WETKLDQSGKQFFIDHQH 821
             .|:::...|..   |.||.|         |:    ||||.      |:..||..|:.|..|...
  Fly  2263 -DHLLLFPARGS---QFYQSN---------FS----ELPSWNFLLSRWKLTLDLFGRVFMDDVGM 2310

  Fly   822 RRTSFMDPRL---PVECPRVVRHRQ--QHSQQQSSVGYYYPDLV-------DGNCLSATSGHINA 874
            ...|.: |.|   ||:..|..||.:  ::.||:        |||       ..:.:..|...:|.
  Fly  2311 EHGSVL-PELRGFPVKEMRFRRHMEKLRNGQQR--------DLVLCKLERNRESLIVQTFKELNT 2366

  Fly   875 SPASSVSGV-PPLPPPR--------PSSSSSSSRSSHGHGHNCNTTSAISCALNADRSAYGAAGM 930
            ...:....: ||:...|        |...|..:||.:        ||.....|            
  Fly  2367 QFGNQSRRIQPPITFNRVKVTFKDEPGEGSGVARSFY--------TSIAEALL------------ 2411

  Fly   931 ASAGATAAGYEDVPIAYNEK--VIAF---LRQPNILEILR-----ERQGQHT--MSRQLREKINI 983
              |.|.....|.|.:..|..  |:.|   ||...:....|     :|:|.::  :.|..||: ..
  Fly  2412 --ASAKIPNLESVQVGTNHSKYVVPFSSILRSRTVSGSSRDQSTLQRRGSNSKILWRSARER-KA 2473

  Fly   984 LRVEGVP---------------------ALERLGHDL--QLTILLSLFEQEIMGFVPIEERSPQG 1025
            |.::..|                     .|:::|..|  ::..:......:|.|.: :|..:||.
  Fly  2474 LNLDARPYTPPNSSDNATPESLNDHLSVHLQQIGERLYPKIHSINQTHAPKITGML-LEIPTPQL 2537

  Fly  1026 SPVLNSRMPQRAPPPFRRDFEA-KLRSFYRKLESKGYGQGPHKLKLHIRRSHLLEDAFRRIMSAN 1089
            ..|::|....|     ::..|| ::.:|.:|.|:......|.|..              .::..:
  Fly  2538 LSVISSDETLR-----QKVNEAIEIITFKQKSETSAQSSQPKKSP--------------SVVVVD 2583

  Fly  1090 KKDLQRGRLAVLWDTEEGLDYGGPSREFFFLLSRELFNPYYGLFEYSANDTYTVQVSPLSAFVDN 1154
            ..|          |..|.|.|....|.|        :.|..|...:...:.              
  Fly  2584 PVD----------DDNEPLFYSPGKRGF--------YTPRQGFASFERINA-------------- 2616

  Fly  1155 CHDWFRFSGRVLGLALVHQYLLDAFFTRPFYKALLRLPVALSDLESLDNEFHQSLQWIRDN---- 1215
                ||..||::||.|:...||..|..|...|.:|...:...||...|...::|.:.|..|    
  Fly  2617 ----FRNIGRLIGLCLLQNELLPLFLQRHVLKYILGRKIKFHDLAFFDPALYESFRQIIQNAQTK 2677

  Fly  1216 ---------DIGTGVDLGLTFCVTEELLGSVVDRELKPGGKNIIINEKNKKEYLERMIKWRLERG 1271
                     ::...:||     :.||..|   :|||.|||:::.:...|..||:.|..::||.:.
  Fly  2678 EGEETINRMELCFVIDL-----MKEEGCG---NRELIPGGRDVAVTSSNIFEYVRRYTEYRLIKS 2734

  Fly  1272 VQEQTESLVRGFYEVIDSRLVSVFDARELELVIAGTAEIDTND----WRLNTEYRSGYHDNHQVI 1332
            .::..|:|..|.::|:....:....|.:|.|::.|..:|:.:.    ...|.|...|.....:..
  Fly  2735 QEKALEALKDGVFDVLPDNSMINLTAEDLRLLLNGVGDINVSTLISYTTFNDESSEGPDKLLKFK 2799

  Fly  1333 VWFWQVIERFSNEQRLRLLQFVTGTSSIP--YEGFSALRGSTGPRRFCIEKWGKPNALPRAHTCF 1395
            .|||.::|:.:..:|..|:.|.||:.::|  .|||..|...|       .:....:.||.|:||.
  Fly  2800 KWFWSIVEKMNIMERQDLVYFWTGSPALPASEEGFQPLPSVT-------IRPADDSHLPTANTCI 2857

  Fly  1396 NRLDLPPYPTPELLYEKLLLAVEETNTFG 1424
            :||.:|.|.:..:|..|:|:|::..| ||
  Fly  2858 SRLYIPLYSSKSILRSKMLMAIKSKN-FG 2885

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42797NP_572574.2 WW 638..667 CDD:278809 0/28 (0%)
HECTc 1068..1424 CDD:238033 86/374 (23%)
HECTc 1092..1423 CDD:214523 86/349 (25%)
hydNP_001287262.1 E3_UbLigase_EDD 150..196 CDD:288409
ZnF_UBR1 1217..1284 CDD:197698
ASF1_hist_chap 1535..1733 CDD:304562 35/190 (18%)
PolyA 2498..2561 CDD:197769 13/68 (19%)
HECTc 2589..2885 CDD:238033 84/337 (25%)
HECTc 2589..2884 CDD:214523 84/336 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45447003
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.830

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