DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hecw and ube3c

DIOPT Version :10

Sequence 1:NP_572574.2 Gene:Hecw / 31905 FlyBaseID:FBgn0261931 Length:1426 Species:Drosophila melanogaster
Sequence 2:NP_956767.2 Gene:ube3c / 393445 ZFINID:ZDB-GENE-040426-1211 Length:1081 Species:Danio rerio


Alignment Length:796 Identity:199/796 - (25%)
Similarity:320/796 - (40%) Gaps:150/796 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   709 LP-TSANSNANSTAPAA-PPPATAIHPAILMLCRPD-------------------------FYSL 746
            || |..||.|:..:.:. ....|..|||     .||                         ..:|
Zfish   352 LPVTECNSRADINSDSEDEEEMTVQHPA-----APDGSWISVHYITEECVQKLDTKQQTNALLTL 411

  Fly   747 LHTNEAALAIYNRNAALKH--------MVMRIRRDPPCFQRYQYNKDLVALVNTFAQMSRELPSC 803
            :..:.|:..::...|::.|        ||.|:|                 |:.:.|..:|.|...
Zfish   412 VWRDSASEDVFTMMASICHTLMVQHRMMVPRVR-----------------LLYSLAFNARFLRHL 459

  Fly   804 WETKLDQSGKQFFIDHQHRRTSFMDPRLPV---ECPRVVRHRQQHSQQQSSVGYYYPDLVDGNCL 865
            |........|..        |..|.|.|.|   ..|..:    :.|.:...:.|.:..|...:.:
Zfish   460 WYLITSMKTKMI--------TGSMVPLLQVMSRGSPMTL----EDSNRIIPLFYLFSSLFSHSLI 512

  Fly   866 SATSGHINASPASSVSGVPPLPPPRPSSSSSSSRSSHGHGHNCNTTSAISCALNADRSAYGAAGM 930
            |.   |.:....||..|         .|.||....|.|.....:.....:| |...:.||.....
Zfish   513 SV---HDSEFFGSSADG---------QSQSSMMPFSLGELVTLSRCLRDAC-LGIIKLAYPETKT 564

  Fly   931 ASAGATAAGYEDVPIAYNEKVIAFLRQ------------PNILEILRERQGQHTM---SRQLREK 980
            .......|.:..|.:..|.:|...::.            .|::::|:.|..:...   ...|.::
Zfish   565 EHKEEYVAAFRSVGVKTNSQVQQRIQAQQKRWVQLFKVITNLVKMLKARDIRRPFCPSGHWLSDE 629

  Fly   981 INILRVEGVPAL-----------ERLGH--DLQLTILLSLFEQEIMGFVPIEERSPQGSPVLNSR 1032
            :|| |.:.|..|           .|:|.  .||.|:.:.|...      |:.....:...:|...
Zfish   630 VNI-RADKVTQLYVPSARHMWRTRRMGRIGPLQSTLDVGLEPP------PLSVSEERHLAILTEL 687

  Fly  1033 MPQRAPPPFRRDFEAKLRSFYR-----KLESKGYGQGPHKLKLHIRRSHLLEDAFRRIMSANKKD 1092
                   ||...||.:::.|.:     |.|.:|.|.....:.:.|||:::.|||:.::...|:.|
Zfish   688 -------PFVVPFEERVKIFQKLIYADKREVQGEGPFLDGVNVTIRRNYIYEDAYDKLSPENEPD 745

  Fly  1093 LQRGRLAVLWDT----EEGLDYGGPSREFFFLLSRELFNPYYGLFEYSANDTYTVQVSPLSAFV- 1152
            |::.....|.:.    |.|:|.||..|||...|.:..|||..|.|: :.|:. .:..||.:..: 
Zfish   746 LKKRIRVHLLNAHGLDEAGIDGGGIFREFLNELLKSGFNPNQGFFK-TTNEG-LLYPSPTAEMLV 808

  Fly  1153 -DNCHDWFRFSGRVLGLALVHQYLLDAFFTRPFYKALL--RLPVALSDLESLDNEFHQSLQWIRD 1214
             ::....:.|.||:||.||....|::..|...|...||  ...|.:..|.|||.|.:::|.:::.
Zfish   809 GESFTRHYYFLGRILGKALYENMLVELPFASFFLSKLLGTSADVDIHHLASLDPEMYRNLLFLKS 873

  Fly  1215 NDIGTGVDLGLTFCVTEELLGSVVDRELKPGGKNIIINEKNKKEYLERMIKWRLERGVQEQTESL 1279
            .: |...||||.|.|....||.....|||||||:|.:...|:..|:..:..:||.:.::....:.
Zfish   874 YE-GDVEDLGLNFTVVNNDLGEAQVVELKPGGKDIPVTTANRIAYIHLVADYRLNKQIRAHCLAF 937

  Fly  1280 VRGFYEVIDSRLVSVFDARELELVIAGT-AEIDTNDWRLNTEYRSGYHDNHQVIVWFWQVIERFS 1343
            .:|...|::...:.:||.:|::::::|. ..|...|.:..|.|..||...|.||..||.|:|.||
Zfish   938 RQGLANVVNLEWLRMFDQQEIQVLVSGAHVPICLEDLKRFTNYSGGYSATHPVIKIFWDVVESFS 1002

  Fly  1344 NEQRLRLLQFVTGTSSIPYEGFSALRGSTGPRRFCIEKWGKP-NALPRAHTCFNRLDLPPYPTPE 1407
            :|::.:||:|||..|..|..||..|..:     |||...|.. ..||.|.||.|.|.||.:..|:
Zfish  1003 DEEKRKLLKFVTSCSRPPLLGFKELYPA-----FCIHNGGTDLERLPTASTCMNLLKLPEFCDPQ 1062

  Fly  1408 LLYEKLLLAVEETNTF 1423
            |:..|||.|:|.:..|
Zfish  1063 LMRNKLLYAIESSAGF 1078

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HecwNP_572574.2 PHA03247 <411..562 CDD:223021
WW 638..667 CDD:459800
HECW1_helix 738..794 CDD:465766 11/88 (13%)
HECTc 1068..1424 CDD:238033 120/366 (33%)
ube3cNP_956767.2 IQ 47..64 CDD:197470
HECTc 723..1079 CDD:238033 120/364 (33%)
Blue background indicates that the domain is not in the aligned region.

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