DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42797 and Wwp2

DIOPT Version :9

Sequence 1:NP_572574.2 Gene:CG42797 / 31905 FlyBaseID:FBgn0261931 Length:1426 Species:Drosophila melanogaster
Sequence 2:NP_001099654.1 Gene:Wwp2 / 291999 RGDID:1310091 Length:870 Species:Rattus norvegicus


Alignment Length:1195 Identity:327/1195 - (27%)
Similarity:460/1195 - (38%) Gaps:357/1195 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   263 AAAVESLLGAAAALQASAHVQRRQQQQHHQHLRQPSPPQH-------RPLERSWPPRAVGRDLKL 320
            |:|..|..|.|...:.|....|....:...|.|||....:       .|.|.....:.:|....|
  Rat     2 ASASSSRAGVALPFEKSQLTLRVVSAKPKVHNRQPRINSYVEVAVDGLPSETKKTGKRIGSSELL 66

  Fly   321 QGDVFQFDILDTDERLAEEMAQGSGSSNNSPLATPPVRFKPLLKKKIG----PDSYINTISTQKV 381
            ..:|...::  |.:...:.......:..|..|.|..|....:||...|    ....:|..:..|.
  Rat    67 WNEVIVLNV--TAQSHLDLKVWSCHTLRNELLGTASVNLSNVLKNNGGKMENTQLTLNLQTENKG 129

  Fly   382 PVHQSYEFPTFPSSSAVGSSSSSPNSLQFPYLRQHRPLTRALSNGKASSSEEQASPRLLLSPKRP 446
            .|....|...|.....|...|                    :.||.|.:...|            
  Rat   130 SVVSGGELTIFLDGPTVDLGS--------------------VPNGSAVTDGSQ------------ 162

  Fly   447 RSPPSGCSTRSASPLDISLSPEQHSPTRGRGVGGALQDAVPPGTPTFHGQRPQQRLLKRVGGGAG 511
              |||..|:.:|      |:||    ||.:          ||.|..|.|   :.|..:..||.| 
  Rat   163 --PPSRESSGTA------LAPE----TRHQ----------PPSTNCFGG---RSRTHRHSGGSA- 201

  Fly   512 AGATGGATG--SPLVCPPTPTHHARRHARLQAVTANSSLASGGAIPSDPPAVSSQLDYIYLQDGG 574
              .|..|||  ||         .||...|......:||..:.|.:..:|...|            
  Rat   202 --RTATATGEQSP---------GARNRHRQPVKNPSSSGLANGTVSEEPTTAS------------ 243

  Fly   575 QEQGQEQSDEVVHISSTRLPSI-----PERSAAAAAAAAAAAAGAALMEPGTGTVSGSSGAGAAG 634
                  ..:|:..:..|..|:.     |..:..:..|.:..|.|.   ||.|   ||:....||.
  Rat   244 ------DPEELSVVGVTSPPAAASSVSPNPNTTSLPAPSTPAEGE---EPST---SGTQQLPAAA 296

  Fly   635 EPP--LPPAWEARMDSHGRIFYIDHTTRTTSWQRPGAAPSGGPAGREQHHRQQLDRRYQSIRRTI 697
            :.|  ||..||.|...:||::|:||.|:||:|:||                              
  Rat   297 QAPDALPAGWEQRQLPNGRVYYVDHNTKTTTWERP------------------------------ 331

  Fly   698 TNESRAAQLYNLPTSANSNANSTAPAAPPPATAIHPAILMLCRPDFYSLLHTNEAALAIYNRNAA 762
                                                                             
  Rat   332 ----------------------------------------------------------------- 331

  Fly   763 LKHMVMRIRRDPPCFQRYQYNKDLVALVNTFAQMSRELPSCWETKLDQSGKQFFIDHQHRRTSFM 827
                                                 ||..||.:.|..|:.:::||..|.|::.
  Rat   332 -------------------------------------LPPGWEKRTDPRGRFYYVDHNTRTTTWQ 359

  Fly   828 DPRLPVECPRVVRHRQQHSQQQSSVGYYYPDLVDGNCLSATSGHIN-----ASPASSVSGVP--P 885
            .|     ....||:.:|...|:             |.|.....|.:     .|.::|....|  |
  Rat   360 RP-----TAEYVRNYEQWQSQR-------------NQLQGAMQHFSQRFLYQSSSASTDHDPLGP 406

  Fly   886 LPPPRPSSSSSSSRSSHGH----GHNCNTTSAISCALNADRSAYGAAGMASAGATAAGYEDVPIA 946
            |||      ....|..:|.    .||..||.     ....|:    .||....|...|:|   :.
  Rat   407 LPP------GWEKRQDNGRVYYVNHNTRTTQ-----WEDPRT----QGMIQEPALPPGWE---MK 453

  Fly   947 YNEKVIAFLRQPNILEILRERQGQHTMSRQLREKINILRVEGVPALERLGHDLQLTILLSLFEQE 1011
            |..:.:.:.                                       :.|:.:.|    .|:..
  Rat   454 YTSEGVRYF---------------------------------------VDHNTRTT----TFKDP 475

  Fly  1012 IMGFVPIEERSPQGSPVLNSRMPQRAPPPFRRDFEAKLRSFYRKLESKGYGQGPHKLKLHIRRSH 1076
            ..||   |..:.|||           |..:.|.|..|...|.....|...   |..:|:.:.|..
  Rat   476 RPGF---ESGTKQGS-----------PGAYERSFRWKYHQFRFLCHSNAL---PSHVKISVSRQT 523

  Fly  1077 LLEDAFRRIMSANKKDLQRGRLAVLWDTEEGLDYGGPSREFFFLLSRELFNPYYGLFEYSANDTY 1141
            |.||:|::||:....||:| ||.::...||||||||.:||:|||||.|:.||.|.||||:..:.|
  Rat   524 LFEDSFQQIMNMKPYDLRR-RLYIIMRGEEGLDYGGIAREWFFLLSHEVLNPMYCLFEYAGKNNY 587

  Fly  1142 TVQVSPLSAFVDNCHDWFRFSGRVLGLALVHQYLLDAFFTRPFYKALLRLPVALSDLESLDNEFH 1206
            .:|::|.|:...:...:|||.||.:.:||.|...:|..||.||||.:|.....|.||||:|.||:
  Rat   588 CLQINPASSINPDHLTYFRFIGRFIAMALYHGKFIDTGFTLPFYKRMLNKRPTLRDLESIDPEFY 652

  Fly  1207 QSLQWIRDNDIGTGVDLGLTFCVTEELLGSVVDRELKPGGKNIIINEKNKKEYLERMIKWRLERG 1271
            .|:.||::|::.. ..|.|.|....|:||.|...|||.||:||.:.|:||:||:..:..||..||
  Rat   653 NSIIWIKENNLDE-CGLELFFIQDMEILGKVTTHELKEGGENIRVTEENKEEYIMLLTDWRFTRG 716

  Fly  1272 VQEQTESLVRGFYEVIDSRLVSVFDARELELVIAGTAEIDTNDWRLNTEYRSGYHDNHQVIVWFW 1336
            |:|||::.:.||.||.....:..||.:||||::.|..|||.:||:.|..||. |..:.:.|.|||
  Rat   717 VEEQTKAFLDGFNEVAPLEWLRYFDEKELELMLCGMQEIDMSDWQKNAIYRH-YTKSSKQIQWFW 780

  Fly  1337 QVIERFSNEQRLRLLQFVTGTSSIPYEGFSALRGSTGPRRFCIEKWGKPNALPRAHTCFNRLDLP 1401
            ||::...||:|:|||||||||..:|..||:.|.||.||::|||::.||...|||:||||||||||
  Rat   781 QVVKEMDNEKRIRLLQFVTGTCRLPVGGFAELIGSNGPQKFCIDRVGKETWLPRSHTCFNRLDLP 845

  Fly  1402 PYPTPELLYEKLLLAVEETNTFGIE 1426
            ||.:.|.|.||||.|:|||..||.|
  Rat   846 PYKSYEQLKEKLLYAIEETEGFGQE 870

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42797NP_572574.2 WW 638..667 CDD:278809 14/28 (50%)
HECTc 1068..1424 CDD:238033 171/355 (48%)
HECTc 1092..1423 CDD:214523 163/330 (49%)
Wwp2NP_001099654.1 C2_E3_ubiquitin_ligase 17..142 CDD:175988 24/126 (19%)
WW 302..331 CDD:278809 14/28 (50%)
WW 332..361 CDD:278809 10/28 (36%)
WW 407..435 CDD:278809 9/38 (24%)
WW 447..477 CDD:238122 6/75 (8%)
HECTc 516..868 CDD:238033 171/354 (48%)
HECTc 539..867 CDD:214523 163/330 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000080
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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