DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42797 and pub2

DIOPT Version :9

Sequence 1:NP_572574.2 Gene:CG42797 / 31905 FlyBaseID:FBgn0261931 Length:1426 Species:Drosophila melanogaster
Sequence 2:NP_593926.1 Gene:pub2 / 2542432 PomBaseID:SPAC1805.15c Length:671 Species:Schizosaccharomyces pombe


Alignment Length:518 Identity:175/518 - (33%)
Similarity:289/518 - (55%) Gaps:56/518 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   952 IAFLRQP--NILEILRERQGQHTMSRQLRE---------------KINI---------------L 984
            :.:|:.|  :::..:...:.::...:||:|               |||:               |
pombe   167 VYYLKSPQLSVISAISHEKLENLTPKQLKEVFSQFLFNNQSKSSLKINLEYKVIKHLLEHYPLAL 231

  Fly   985 RVEGVPALER----LGHDLQLTILLSLFEQEIMGFVPIEERS-----PQGSPVLNSRMPQRAP-- 1038
            .|....|:|:    .|.:::|:      |...:.||....::     |:.:.|.:..:.:...  
pombe   232 SVRQQVAVEKGPLPAGWEMRLS------EDYHVYFVDHSTKTTTWSDPRDNVVASDSVSENTDSI 290

  Fly  1039 PPFRRDFEAKLRSFYRKLESKGYGQGPHKLKLHIRRSHLLEDAFRRIMSANKKDLQRGRLAVLWD 1103
            .....:::.|:...|.:.|   ......:|:|.:.|:...|||:..|...:..|::: :|.:.:.
pombe   291 QQINDEYQRKIAYMYDRPE---MAVNDAQLQLKVSRATTFEDAYDIISKLSVSDMKK-KLLIRFR 351

  Fly  1104 TEEGLDYGGPSREFFFLLSRELFNPYYGLFEYSANDTYTVQVSPLSAFVDNCHDWFRFSGRVLGL 1168
            .|:||||||.|||||::||..:|||.|.||||:.:|.|.:|:||||:...:...:|||.|||:||
pombe   352 NEDGLDYGGVSREFFYILSHAIFNPGYSLFEYATDDNYGLQISPLSSVNPDFRSYFRFVGRVMGL 416

  Fly  1169 ALVHQYLLDAFFTRPFYKALLRLPVALSDLESLDNEFHQSLQWIRDNDIGTGVDLGLTFCVTEEL 1233
            |:.|:..||..|..||||.:|:.|:.|.|::.:|..:::||:||::||:..  .|.|.|.|.|..
pombe   417 AIYHRRYLDVQFVLPFYKRILQKPLCLEDVKDVDEVYYESLKWIKNNDVDE--SLCLNFSVEENR 479

  Fly  1234 LGSVVDRELKPGGKNIIINEKNKKEYLERMIKWRLERGVQEQTESLVRGFYEVIDSRLVSVFDAR 1298
            .|..|..:|.|.|:||.:|.:||..||:.:.:.:|....:||..:|..|..|:|...::.:|:..
pombe   480 FGESVTVDLIPNGRNIAVNNQNKMNYLKALTEHKLVTSTEEQFNALKGGLNELIPDSVLQIFNEN 544

  Fly  1299 ELELVIAGTAEIDTNDWRLNTEYRSGYHDNHQVIVWFWQVIERFSNEQRLRLLQFVTGTSSIPYE 1363
            ||:.::.|..:||..||:..|:||| |.:...:::|||:::..:|.|::.:||||.||||.:|..
pombe   545 ELDTLLNGKRDIDVQDWKRFTDYRS-YTETDDIVIWFWELLSEWSPEKKAKLLQFATGTSRLPLS 608

  Fly  1364 GFSALRGSTGPRRFCIEKWGKPNALPRAHTCFNRLDLPPYPTPELLYEKLLLAVEETNTFGIE 1426
            ||..:.||.|||:|.|||.|..:.||:|||||||||:|||.:.|.|.:||.:|::||..||.|
pombe   609 GFKDMHGSDGPRKFTIEKVGHISQLPKAHTCFNRLDIPPYNSKEELEQKLTIAIQETAGFGTE 671

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42797NP_572574.2 WW 638..667 CDD:278809
HECTc 1068..1424 CDD:238033 150/355 (42%)
HECTc 1092..1423 CDD:214523 143/330 (43%)
pub2NP_593926.1 HUL4 1..671 CDD:227354 174/516 (34%)
C2_Smurf-like 7..128 CDD:176028
WW 243..275 CDD:197736 6/37 (16%)
HECTc 317..669 CDD:238033 150/355 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000080
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11254
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.910

Return to query results.
Submit another query.