DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42797 and etc-1

DIOPT Version :9

Sequence 1:NP_572574.2 Gene:CG42797 / 31905 FlyBaseID:FBgn0261931 Length:1426 Species:Drosophila melanogaster
Sequence 2:NP_495842.1 Gene:etc-1 / 174388 WormBaseID:WBGene00008429 Length:1001 Species:Caenorhabditis elegans


Alignment Length:742 Identity:167/742 - (22%)
Similarity:293/742 - (39%) Gaps:165/742 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   781 QYNKDLVALVNTFAQMSR--ELPSCWETKLDQSGKQFFIDHQHRRTSFMDPRLP-VECPRVVRHR 842
            :::..::..:|....:|.  .|.:.....|.|..::..|.::.||.:.:...|| |:...::..|
 Worm   311 EHHSKIMRSLNVKEDLSEFGRLRTSVNNHLKQYCEEMLISNEFRRAACIYANLPGVQVETIISLR 375

  Fly   843 QQHSQQQSSVGYYYPDLVDGNCLSATSGHINASPASSVSGVP-----PLPPPRPSSSSSSSRSSH 902
            :..||        :.||     |:|::..:.|..|......|     |:....|           
 Worm   376 KYFSQ--------FLDL-----LAASNTFVEALYAFIARLCPNGEFDPIDAKSP----------- 416

  Fly   903 GHGHNCNTTSAISCALNADRSAYGAAGMASAGATAAGYEDVPIAYNEKVIAFLRQPNILEILRER 967
                ..|........||...|:...:.....        |:.:.: :..:.|||..:|..|    
 Worm   417 ----KVNALELFCNCLNKRVSSVADSDFVPT--------DIFVDF-DHTVEFLRDVSIKLI---- 464

  Fly   968 QGQH----TMSR------QLREKINILRVEGVPALERLGHDLQLTILLSLFEQEI-MGFVPIEER 1021
               |    ||:|      .|:||:.....:.....|.:     .:||.::::::| :.:.|.|..
 Worm   465 ---HLMFPTMARGDLYSGNLKEKMYKAETDWKDVTESV-----FSILGAIYQKDIRLKYFPEEFW 521

  Fly  1022 SPQGSPVLNS-----RMPQRAPP------------------------------------------ 1039
            :..|..||:.     |||:|..|                                          
 Worm   522 TNHGREVLSGIGEHRRMPRRRMPNGRLQIERTMDTEFVERLAAIYEMDSDSENDDEDEDNNLPAV 586

  Fly  1040 -----------PFRRDFEAKLRSFYRKLE-------SKGYGQGPHKLKLHIRRSHLLEDAFRRI- 1085
                       ||...|..:::.|.|.|.       :..:|.|.:...:.:||..:..|||... 
 Worm   587 LRRAICVMKHIPFIVPFMDRVKLFTRLLNQDKEKHYTSTFGMGFNGPSVTVRRDQVYMDAFETFA 651

  Fly  1086 --MSANK----KDLQRGRLAVLWD--TEEGLDYGGPSREFFFLLSRELFNPYYGLFEYSAND-TY 1141
              |..:|    |.:.|.:: |.|.  .|.|:|.||..|||...|.:..||...|.|.::.:. .|
 Worm   652 PKMQGDKVNDLKSMVRVKM-VNWAGMNESGIDGGGIFREFLSELLKTAFNVERGFFTFTESKLLY 715

  Fly  1142 TVQVSPLSAFVDNCHDWFRFSGRVLGLALVHQYLLDA----FFTRPFYKALLRLPVALSDLESLD 1202
            ....:|....|| |...|:|.||::|..:..:.|.:.    ||....::......|.|..::|.|
 Worm   716 PNPTAPFLLGVD-CLAHFQFIGRMIGKLIYERQLQEVRFAEFFIAQIFETDKNKDVDLQHMKSFD 779

  Fly  1203 N---EFHQSLQWIRDNDIGTGVDLGLTFCVTEELLGSVVDRELKPGGKNIIINEKNKKEYLERMI 1264
            .   :..::||.:.:.::.   :|.|.|.|....:|.|.:..|||.|....:..:|..||:...:
 Worm   780 PIIFKHLKALQKMNNRELD---ELQLDFSVVTSDMGLVRNVNLKPNGSKFRVTVENVHEYVRLYV 841

  Fly  1265 KWRLERGVQEQTESLVRGFYEVIDSRLVSVFDARELELVIAGTAEIDT-NDWRLNTEYR--SGYH 1326
            .:.|::.:....:::.:|..|:|....:.:|...||:::|||..|:.| .:.|...|.|  :|..
 Worm   842 NYHLKQRIASMVDAVRKGISEIISIEWMRMFAPHELQIMIAGYEEVFTAKELRKFCELRFAAGTQ 906

  Fly  1327 D-NHQVIVWFWQVIERFSNEQRLRLLQFVTGTSSIPYEGFSALRGSTGPRRFCIEKWGKPNALPR 1390
            | |::.:  ||.||::.||:.:..||:||||.|..|.:||.:::    ||...:......:.||.
 Worm   907 DINYEEM--FWDVIDKLSNDDKKALLKFVTGCSRAPVDGFKSIQ----PRMGVLVIPSSDDELPT 965

  Fly  1391 AHTCFNRLDLPPYPTPELLYEKLLLAV 1417
            :.||.|.|.:|.|.....|.|||..|:
 Worm   966 SATCMNMLRIPKYSNRTKLEEKLRYAI 992

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42797NP_572574.2 WW 638..667 CDD:278809
HECTc 1068..1424 CDD:238033 105/371 (28%)
HECTc 1092..1423 CDD:214523 97/340 (29%)
etc-1NP_495842.1 HECTc 661..998 CDD:214523 98/343 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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