DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42797 and Ube3b

DIOPT Version :9

Sequence 1:NP_572574.2 Gene:CG42797 / 31905 FlyBaseID:FBgn0261931 Length:1426 Species:Drosophila melanogaster
Sequence 2:NP_473434.2 Gene:Ube3b / 117146 MGIID:1891295 Length:1070 Species:Mus musculus


Alignment Length:393 Identity:126/393 - (32%)
Similarity:197/393 - (50%) Gaps:39/393 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly  1065 PHKLKLHIRRSHLLEDAFRRIMSANKKDLQRGRLAV-----LWDTEEGLDYGGPSREFFFLLSRE 1124
            ||...:.||||.:|||.:.::...::..: :|.:.|     |...|.|:|..|..:||...:.:.
Mouse   680 PHVTHITIRRSRMLEDGYEQLRQLSQHAM-KGVIRVKFVNDLGVDEAGIDQDGVFKEFLEEIIKR 743

  Fly  1125 LFNPYYGLFEYSANDTYTVQVSPLSAFVDNCHDWFRFSGRVLGLALVHQYLLDAFFTRPFYKALL 1189
            :|:|...||:.::.|. .:..||.|...:|....|.|.|::||.|:....::|..|...|...:|
Mouse   744 VFDPALNLFKTTSGDE-RLYPSPTSYIHENYLQLFEFVGKMLGKAVYEGIVVDVPFASFFLSQML 807

  Fly  1190 R-----LPVALSDLESLDNEFHQSLQWIR--DNDIGTGVDLGLTFCVTEELLGSVVDRELKPGGK 1247
            .     ...::.:|.|||:||:::|..|:  |.||   .|||||....|:::|.:|..||.||||
Mouse   808 GHHHSVFYSSVDELPSLDSEFYKNLTSIKRYDGDI---ADLGLTLSYDEDVMGQLVCHELVPGGK 869

  Fly  1248 NIIINEKNKKEYLERMIKWRLERGVQEQTESLVRGFYEVIDSRLVSVFDARELELVIAG-TAEID 1311
            .|.:.::||..|:..|..:|:...::.||.:|:.||..:|....:.:|...||:.:|:| .||||
Mouse   870 TIPVTDENKISYIHLMAHFRMHTQIKNQTAALISGFRSIIKPEWIRMFSTPELQRLISGDNAEID 934

  Fly  1312 TNDWRLNTEYRSGYHDNHQVIVWFWQVI-ERFSNEQRLRLLQFVTGTSSIPYEGFSALR------ 1369
            ..|.:.:|.|..|:|.:|:||:|.|.:: ..|:.|:|...|:|||..|..|..||:.|:      
Mouse   935 LEDLKKHTVYYGGFHGSHRVIIWLWDILASDFTPEERAMFLKFVTSCSRPPLLGFAYLKPPFSIR 999

  Fly  1370 --------------GSTGPRRFCIEKWGKPNALPRAHTCFNRLDLPPYPTPELLYEKLLLAVEET 1420
                          ||.....|.|.|......||.:.||||.|.||.|....:|.|||..|:...
Mouse  1000 CVEVSDDQDTGDTLGSVLRGFFTIRKREPGGRLPTSSTCFNLLKLPNYSKKSVLREKLRYAISMN 1064

  Fly  1421 NTF 1423
            ..|
Mouse  1065 TGF 1067

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42797NP_572574.2 WW 638..667 CDD:278809
HECTc 1068..1424 CDD:238033 124/390 (32%)
HECTc 1092..1423 CDD:214523 116/364 (32%)
Ube3bNP_473434.2 HECTc 684..1068 CDD:238033 124/389 (32%)
HECTc 709..1067 CDD:214523 116/361 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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