DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hecw and wwp2

DIOPT Version :10

Sequence 1:NP_572574.2 Gene:Hecw / 31905 FlyBaseID:FBgn0261931 Length:1426 Species:Drosophila melanogaster
Sequence 2:NP_001090841.1 Gene:wwp2 / 100038252 XenbaseID:XB-GENE-961516 Length:729 Species:Xenopus tropicalis


Alignment Length:1028 Identity:288/1028 - (28%)
Similarity:415/1028 - (40%) Gaps:326/1028 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   424 SNGKASSSEEQASPRLLLSPKRPRSPPSGCSTRS---ASPLDISLSPEQHSPTRGRGVGGALQDA 485
            |:|...:|:.....:|.||.|. .|.|...:.::   ||..|::::.::|..        |::||
 Frog     3 SSGSNQTSDGFTQEKLQLSVKE-NSVPLQINLQAAHKASGDDLTIALDEHME--------AVEDA 58

  Fly   486 VPPGTPTF-HGQRPQQRLLKRVGGGAGAGATGGATGSPLVCPPTPTHHARRHARLQAVTANSSLA 549
              .....| :|....:::                 .||   |.:.:..:.:..:.|..|:|.::.
 Frog    59 --DSEMVFENGHYALEKI-----------------SSP---PQSASSDSSQPIKNQDNTSNITVL 101

  Fly   550 SGGAIPSDPPAVSSQLDYIYLQDGGQEQGQEQSDEVVHISSTRLPSIPERSAAAAAAAAAAAAGA 614
            ..|   ....|.||:||.            ...||.....|:.|||:.....:.......:...:
 Frog   102 VNG---ESSHATSSELDV------------PAQDEAFSNISSPLPSLGSELRSEDNEDTQSLQPS 151

  Fly   615 ALMEPGTGTVSG------SSG---------AGAAGEPPLPPAWEARMDSHGRIFYIDHTTRTTSW 664
            ||.....|...|      |:|         .....|.|||..||.|:|:.||.:|:||.||||:|
 Frog   152 ALTPTSEGLPPGWEQRELSNGRVYYVDHNTKSTTWERPLPLGWEKRVDNRGRFYYVDHNTRTTTW 216

  Fly   665 QRPGA------APSGGPAGREQHHRQQLDRRYQSIRRTITNESRAAQLYNLPTSANSNANSTAPA 723
            |||.|      ........:.|...|||.:|:               ||. |:||   |....|.
 Frog   217 QRPTAEYVRNYEQWQSQRNQMQGAMQQLSQRF---------------LYQ-PSSA---APDNDPL 262

  Fly   724 APPPATAIHPAILMLCRPDFYSLLHTNEAALAIYNRNAALKHMVMRIRRDPPCFQRYQYNKDLVA 788
            .|                                                               
 Frog   263 GP--------------------------------------------------------------- 264

  Fly   789 LVNTFAQMSRELPSCWETKLDQSGKQFFIDHQHRRTSFMDPRLPVECPRVVRHRQQHSQQQSSVG 853
                       ||:.||.:.| :|:.::::|..|.|.:.|||                       
 Frog   265 -----------LPNGWEKRQD-NGRVYYVNHNTRTTQWEDPR----------------------- 294

  Fly   854 YYYPDLVDGNCLSATSGHINASPASSVSGVPPLPPPRPSSSSSSSRSSHGHGHNCNTTSAISCAL 918
                          |.|.|..         |.|||                              
 Frog   295 --------------TQGMIQE---------PALPP------------------------------ 306

  Fly   919 NADRSAYGAAGMASAGATAAGYEDVPIAYNEKVIAFLRQPNILEILRERQGQHTMSRQLREKINI 983
                                |:|   :.|..:.|.:.                            
 Frog   307 --------------------GWE---MKYTSEGIRYF---------------------------- 320

  Fly   984 LRVEGVPALERLGHDLQLTILLSLFEQEIMGFVPIEERSPQGSPVLNSRMPQRAPPPFRRDFEAK 1048
                       :.|:.:.|    .|:....||   :....||.          :|..:.|.|..|
 Frog   321 -----------VDHNKRAT----TFKDPRPGF---DSGVKQGG----------SPGAYDRSFRWK 357

  Fly  1049 LRSFYRKLESKGYGQGPHKLKLHIRRSHLLEDAFRRIMSANKKDLQRGRLAVLWDTEEGLDYGGP 1113
            ...|.....|...   |..:|:.:.|..|.||:|::||:....||:| ||.::...||||||||.
 Frog   358 YHQFRFLCHSNAL---PSHVKISVSRQTLFEDSFQQIMNMKPYDLRR-RLYIIMRGEEGLDYGGI 418

  Fly  1114 SREFFFLLSRELFNPYYGLFEYSANDTYTVQVSPLSAFVDNCHDWFRFSGRVLGLALVHQYLLDA 1178
            :||:|||||.|:.||.|.||||:..:.|.:|::|.|:...:...:|||.||.:.:||.|...:|.
 Frog   419 AREWFFLLSHEVLNPMYCLFEYAGKNNYCLQINPASSINPDHLTYFRFIGRFIAMALYHGKFIDT 483

  Fly  1179 FFTRPFYKALLRLPVALSDLESLDNEFHQSLQWIRDNDIGTGVDLGLTFCVTEELLGSVVDRELK 1243
            .||.||||.:|.....|.||||:|.||:.|:.||:||:: ...:|.|.|....|:||.|...:||
 Frog   484 GFTLPFYKRMLNKKPTLRDLESIDPEFYNSIMWIKDNNL-EECELELYFVQDMEILGEVTSHKLK 547

  Fly  1244 PGGKNIIINEKNKKEYLERMIKWRLERGVQEQTESLVRGFYEVIDSRLVSVFDARELELVIAGTA 1308
            .||:||.:.|:||:|::..:..||..|||:|||.:.:.||.||:....:..||.:||||::.|..
 Frog   548 EGGENIRVTEENKEEFISLLTDWRFTRGVEEQTNAFLDGFKEVVPLEWLRYFDEKELELMLCGMQ 612

  Fly  1309 EIDTNDWRLNTEYRSGYHDNHQVIVWFWQVIERFSNEQRLRLLQFVTGTSSIPYEGFSALRGSTG 1373
            |||..||:.||.||. |..|.:.:.|||||::...||:|:|||||||||..:|..||..|.||.|
 Frog   613 EIDIADWQKNTIYRH-YTKNSKQVQWFWQVVKEMDNEKRIRLLQFVTGTCRLPVGGFVELIGSNG 676

  Fly  1374 PRRFCIEKWGKPNALPRAHTCFNRLDLPPYPTPELLYEKLLLAVEETNTFGIE 1426
            |::|||::.||...|||:||||||||||||.:.|.|.||||.|:|||..||.|
 Frog   677 PQKFCIDRVGKDTWLPRSHTCFNRLDLPPYKSYEQLKEKLLFAIEETEGFGQE 729

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HecwNP_572574.2 PHA03247 <411..562 CDD:223021 26/141 (18%)
WW 638..667 CDD:459800 17/28 (61%)
HECW1_helix 738..794 CDD:465766 0/55 (0%)
HECTc 1068..1424 CDD:238033 171/355 (48%)
wwp2NP_001090841.1 WW 160..189 CDD:459800 4/28 (14%)
WW 190..219 CDD:459800 17/28 (61%)
WW 264..294 CDD:197736 11/104 (11%)
WW 305..335 CDD:238122 9/125 (7%)
HECTc 375..727 CDD:238033 171/354 (48%)

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