DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tbcc and rpi-2

DIOPT Version :10

Sequence 1:NP_722959.1 Gene:Tbcc / 319048 FlyBaseID:FBgn0051961 Length:355 Species:Drosophila melanogaster
Sequence 2:NP_500127.2 Gene:rpi-2 / 187156 WormBaseID:WBGene00019536 Length:341 Species:Caenorhabditis elegans


Alignment Length:204 Identity:51/204 - (25%)
Similarity:78/204 - (38%) Gaps:49/204 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 KKKFGFSGKK----TVTKPKVPPNKDIVDAKLSKVPEKLGS--NFTWTIANRTNEHIVLDSAKVN 187
            ||.||...|:    .|::..||.            ||:.|.  .::|   :|..        |||
 Worm     7 KKLFGRRSKREDRYKVSEDAVPK------------PEEGGEPPKYSW---DRRE--------KVN 48

  Fly   188 GQDITISKLNHCLVELQGHPG--------------------SVQVSRASKCTLLCGPIARSFFAE 232
            .:|.||:.:::..::.:...|                    .|.:.....||::.||.|.|.|..
 Worm    49 AEDFTIANIHNTTLKKESKDGGPLQMENCTDSTILYLYQTSQVIIDDCRHCTIVLGPAAGSVFVR 113

  Fly   233 NLEDCTLSIACQQLRLHSSRSIRIYMHVTCRAIIEDCKSIEIGEYNYDYSKLEADYLASGLNKAQ 297
            :..:||:..:|||||.....||||.:......|:|:...|........|.:|:....|.||....
 Worm   114 DCANCTIFTSCQQLRTRDCTSIRISILCPTEPIVENSSDIHFFHLAMRYPELKDQMHAVGLRPFT 178

  Fly   298 NNYTDVADF 306
            |....|.||
 Worm   179 NRIASVHDF 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TbccNP_722959.1 TBCC_N 14..128 CDD:465258
TBCC 188..306 CDD:462331 33/137 (24%)
rpi-2NP_500127.2 TBCC 69..187 CDD:462331 30/117 (26%)
Blue background indicates that the domain is not in the aligned region.

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