DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31960 and Cetn4

DIOPT Version :10

Sequence 1:NP_722942.1 Gene:CG31960 / 319047 FlyBaseID:FBgn0051960 Length:148 Species:Drosophila melanogaster
Sequence 2:NP_001258080.1 Gene:Cetn4 / 688611 RGDID:1586489 Length:168 Species:Rattus norvegicus


Alignment Length:143 Identity:58/143 - (40%)
Similarity:88/143 - (61%) Gaps:0/143 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ELSVEEQDLLKNIYSLLDKDNEGAITSKELGMVIRALGRQPNESEVQSMINEVDSDGNGSIAKEE 67
            ||:..::..:|..:.|.|.|..|.|..|||.:.:||||.:|.:.||:.:|.|:|.:|.|:|..|:
  Rat    20 ELNDTQKQEIKEAFDLFDIDGSGTIDLKELKIAMRALGFEPKKEEVKQLITEIDKEGTGTICFED 84

  Fly    68 FCNVILRKMHDTNKEEELRDAFRVFDKENNGYISTTELRAVFMALGEKLEDDELEEMIREYDLDQ 132
            |..::..||.:.:::||:..||::||.:..|.||...::.|...|||.|.:|||:||:.|.|.|.
  Rat    85 FFAIMSIKMSEKDEKEEILKAFKLFDDDATGSISLNNIKRVAKELGENLTEDELQEMLDEADRDG 149

  Fly   133 DNHINFEEFTNMM 145
            |..||.|||..||
  Rat   150 DGEINEEEFLKMM 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31960NP_722942.1 PTZ00184 2..148 CDD:185504 58/143 (41%)
Cetn4NP_001258080.1 PTZ00183 13..168 CDD:185503 58/143 (41%)

Return to query results.
Submit another query.