DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31960 and Ocm

DIOPT Version :10

Sequence 1:NP_722942.1 Gene:CG31960 / 319047 FlyBaseID:FBgn0051960 Length:148 Species:Drosophila melanogaster
Sequence 2:XP_006248914.1 Gene:Ocm / 25503 RGDID:3222 Length:129 Species:Rattus norvegicus


Alignment Length:72 Identity:21/72 - (29%)
Similarity:38/72 - (52%) Gaps:3/72 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LSVEEQDLLKNIYSLLDKDNEGAITSKELGMVIRAL---GRQPNESEVQSMINEVDSDGNGSIAK 65
            ||......:|:|:..:|.|..|.:...||...::..   .|:..|||.:|:::..|:||:|.|..
  Rat    56 LSKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGA 120

  Fly    66 EEFCNVI 72
            :||..::
  Rat   121 DEFQEMV 127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31960NP_722942.1 PTZ00184 2..148 CDD:185504 21/72 (29%)
OcmXP_006248914.1 EFh_parvalbumin_beta 29..129 CDD:319998 21/72 (29%)
EF-hand motif 29..58 CDD:319998 1/1 (100%)
EF-hand motif 63..92 CDD:319998 7/28 (25%)
EF-hand motif 102..129 CDD:319998 9/26 (35%)

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