DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31960 and cmd-1

DIOPT Version :10

Sequence 1:NP_722942.1 Gene:CG31960 / 319047 FlyBaseID:FBgn0051960 Length:148 Species:Drosophila melanogaster
Sequence 2:NP_503386.1 Gene:cmd-1 / 178614 WormBaseID:WBGene00000552 Length:149 Species:Caenorhabditis elegans


Alignment Length:147 Identity:84/147 - (57%)
Similarity:111/147 - (75%) Gaps:0/147 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DELSVEEQDLLKNIYSLLDKDNEGAITSKELGMVIRALGRQPNESEVQSMINEVDSDGNGSIAKE 66
            |:|:.|:....|..:||.|||.:|.||:||||.|:|:||:.|.|:|:|.||||||:||||:|...
 Worm     3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 67

  Fly    67 EFCNVILRKMHDTNKEEELRDAFRVFDKENNGYISTTELRAVFMALGEKLEDDELEEMIREYDLD 131
            ||..::.|||.||:.|||:|:|||||||:.||:||..|||.|...|||||.|:|::|||||.|:|
 Worm    68 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADID 132

  Fly   132 QDNHINFEEFTNMMTTR 148
            .|..:|:|||..||||:
 Worm   133 GDGQVNYEEFVTMMTTK 149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31960NP_722942.1 PTZ00184 2..148 CDD:185504 83/145 (57%)
cmd-1NP_503386.1 PTZ00184 1..149 CDD:185504 83/145 (57%)

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