DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sbat and NAA38

DIOPT Version :9

Sequence 1:NP_001259971.1 Gene:Sbat / 319043 FlyBaseID:FBgn0051950 Length:121 Species:Drosophila melanogaster
Sequence 2:NP_115732.2 Gene:NAA38 / 84316 HGNCID:28212 Length:173 Species:Homo sapiens


Alignment Length:83 Identity:36/83 - (43%)
Similarity:51/83 - (61%) Gaps:5/83 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 QMNDASLTPGRRKLQKWLGRVLRIVITDGRVLVGFFNCTDRDANIVLSMCAEYL-----VEGQEP 91
            :..|::....|::|:..|.:.:||.:||||.|||.|.|||||.|::|....|:|     ....||
Human    80 EREDSAAERARQQLEALLNKTMRIRMTDGRTLVGCFLCTDRDCNVILGSAQEFLKPSDSFSAGEP 144

  Fly    92 RLLGNVMVPGQHIVSLSI 109
            |:||..||||.||||:.:
Human   145 RVLGLAMVPGHHIVSIEV 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SbatNP_001259971.1 LSMD1 42..110 CDD:212486 35/73 (48%)
NAA38NP_115732.2 LSMD1 90..163 CDD:212486 35/73 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165144539
Domainoid 1 1.000 67 1.000 Domainoid score I9832
eggNOG 1 0.900 - - E1_COG1958
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 73 1.000 Inparanoid score I5297
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1549327at2759
OrthoFinder 1 1.000 - - FOG0004610
OrthoInspector 1 1.000 - - oto89694
orthoMCL 1 0.900 - - OOG6_105331
Panther 1 1.100 - - LDO PTHR10701
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6149
SonicParanoid 1 1.000 - - X4939
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1514.790

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