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Protein Alignment Sbat and AT4G18372
DIOPT Version :9
Sequence 1: | NP_001259971.1 |
Gene: | Sbat / 319043 |
FlyBaseID: | FBgn0051950 |
Length: | 121 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001328000.1 |
Gene: | AT4G18372 / 827565 |
AraportID: | AT4G18372 |
Length: | 112 |
Species: | Arabidopsis thaliana |
Alignment Length: | 83 |
Identity: | 28/83 - (33%) |
Similarity: | 41/83 - (49%) |
Gaps: | 7/83 - (8%) |
- Green bases have known domain annotations that are detailed below.
Fly 44 KLQKWLGRVLRIVITDGRVLVGFFNCTDRDANIVLSMCAEY------LVEGQEPRLLGNVMVPGQ 102
:|:|.|.|.:.:.|.|||..:|.|:|.|:..||:|....|| .....|.|.||.:::|..
plant 26 RLRKLLFRQMLVGIKDGRFFLGNFHCIDKQGNIILQDTVEYRSIRRSSPSPTEQRCLGMILIPSS 90
Fly 103 HIVSLSID-EPDPQSSLL 119
...|..:| ..|.|.||:
plant 91 CRTSCHVDCSIDEQLSLI 108
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Sbat | NP_001259971.1 |
LSMD1 |
42..110 |
CDD:212486 |
23/71 (32%) |
AT4G18372 | NP_001328000.1 |
LSMD1 |
24..98 |
CDD:212486 |
23/71 (32%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
1 |
1.000 |
- |
- |
|
|
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
1 |
1.050 |
43 |
1.000 |
Inparanoid score |
I2693 |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1549327at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0004610 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_105331 |
Panther |
1 |
1.100 |
- |
- |
LDO |
PTHR10701 |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
1 |
0.960 |
- |
- |
|
|
|
8 | 7.930 |
|
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