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Protein Alignment Sbat and SNRPN
DIOPT Version :10
| Sequence 1: | NP_722859.1 |
Gene: | Sbat / 319043 |
FlyBaseID: | FBgn0051950 |
Length: | 121 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_001365180.1 |
Gene: | SNRPN / 6638 |
HGNCID: | 11164 |
Length: | 244 |
Species: | Homo sapiens |
| Alignment Length: | 94 |
Identity: | 25/94 - (26%) |
| Similarity: | 51/94 - (54%) |
Gaps: | 9/94 - (9%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 33 MNDASLTPGRRKLQKWLGRVLRIVITDGRVLVGFFNCTDRDANIVLSMCAEY---------LVEG 88
|.|:.......|:.:.:...:|.::.|||:.:|.|...|:..|::|..|.|: ..|.
Human 1 MMDSQTVGKSSKMLQHIDYRMRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNAKQPER 65
Fly 89 QEPRLLGNVMVPGQHIVSLSIDEPDPQSS 117
:|.|:||.|::.|:::||::::.|.|:.:
Human 66 EEKRVLGLVLLRGENLVSMTVEGPPPKDT 94
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| Sbat | NP_722859.1 |
LSMD1 |
42..110 |
CDD:212486 |
21/76 (28%) |
| SNRPN | NP_001365180.1 |
Sm_B |
9..87 |
CDD:212464 |
21/77 (27%) |
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