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Protein Alignment Sbat and SmB
DIOPT Version :9
Sequence 1: | NP_001259971.1 |
Gene: | Sbat / 319043 |
FlyBaseID: | FBgn0051950 |
Length: | 121 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001188780.1 |
Gene: | SmB / 34426 |
FlyBaseID: | FBgn0262601 |
Length: | 199 |
Species: | Drosophila melanogaster |
Alignment Length: | 87 |
Identity: | 29/87 - (33%) |
Similarity: | 50/87 - (57%) |
Gaps: | 10/87 - (11%) |
- Green bases have known domain annotations that are detailed below.
Fly 38 LTPGR-RKLQKWLGRVLRIVITDGRVLVGFFNCTDRDANIVLSMCAEY---------LVEGQEPR 92
:|.|: .|:.:.|...:|||:.|.|..:|.|...|:..|::|..|.|: :.|.:|.|
Fly 1 MTIGKNNKMIQHLNYRVRIVLQDSRTFIGTFKAFDKHMNLILGDCEEFRKIRSKNSKVPEREEKR 65
Fly 93 LLGNVMVPGQHIVSLSIDEPDP 114
:||.|::.|::||||:::.|.|
Fly 66 VLGFVLLRGENIVSLTVEGPPP 87
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Sbat | NP_001259971.1 |
LSMD1 |
42..110 |
CDD:212486 |
25/77 (32%) |
SmB | NP_001188780.1 |
Sm_B |
5..82 |
CDD:212464 |
25/76 (33%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG1958 |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
P |
PTHR10701 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.910 |
|
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