DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sbat and Naa38

DIOPT Version :9

Sequence 1:NP_001259971.1 Gene:Sbat / 319043 FlyBaseID:FBgn0051950 Length:121 Species:Drosophila melanogaster
Sequence 2:XP_038941372.1 Gene:Naa38 / 287429 RGDID:1559617 Length:126 Species:Rattus norvegicus


Alignment Length:83 Identity:36/83 - (43%)
Similarity:50/83 - (60%) Gaps:5/83 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 QMNDASLTPGRRKLQKWLGRVLRIVITDGRVLVGFFNCTDRDANIVLSMCAEYL-----VEGQEP 91
            :..|:.....|::|:..|.:.:||.:||||.|||.|.|||||.|::|....|:|     ....||
  Rat    33 EQEDSPAARARQQLEALLNKTMRIRMTDGRTLVGCFLCTDRDCNVILGSAQEFLKPSDSFSAGEP 97

  Fly    92 RLLGNVMVPGQHIVSLSI 109
            |:||..||||.||||:.:
  Rat    98 RVLGLAMVPGHHIVSIEV 115

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SbatNP_001259971.1 LSMD1 42..110 CDD:212486 35/73 (48%)
Naa38XP_038941372.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166338243
Domainoid 1 1.000 67 1.000 Domainoid score I9628
eggNOG 1 0.900 - - E1_COG1958
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 73 1.000 Inparanoid score I5193
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1549327at2759
OrthoFinder 1 1.000 - - FOG0004610
OrthoInspector 1 1.000 - - oto96805
orthoMCL 1 0.900 - - OOG6_105331
Panther 1 1.100 - - LDO PTHR10701
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4939
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.760

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