DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sbat and SmB

DIOPT Version :10

Sequence 1:NP_722859.1 Gene:Sbat / 319043 FlyBaseID:FBgn0051950 Length:121 Species:Drosophila melanogaster
Sequence 2:XP_315523.4 Gene:SmB / 1276207 VectorBaseID:AGAMI1_010718 Length:202 Species:Anopheles gambiae


Alignment Length:87 Identity:31/87 - (35%)
Similarity:49/87 - (56%) Gaps:10/87 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 LTPGR-RKLQKWLGRVLRIVITDGRVLVGFFNCTDRDANIVLSMCAEY---------LVEGQEPR 92
            :|.|: .|:.:.|...:|||:.|.|..:|.|...|:..|::|..|.|:         |.|.:|.|
Mosquito     1 MTIGKNNKMIQLLNYRVRIVLQDSRTFIGTFKAFDKHMNLILGDCEEFRKIKPKNTKLPEREEKR 65

  Fly    93 LLGNVMVPGQHIVSLSIDEPDP 114
            :||.|::.|.:||||:|:.|.|
Mosquito    66 VLGFVLLRGGNIVSLTIEGPPP 87

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SbatNP_722859.1 LSMD1 42..110 CDD:212486 26/77 (34%)
SmBXP_315523.4 Sm_B 5..82 CDD:212464 26/76 (34%)

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