DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sbat and naa38

DIOPT Version :9

Sequence 1:NP_001259971.1 Gene:Sbat / 319043 FlyBaseID:FBgn0051950 Length:121 Species:Drosophila melanogaster
Sequence 2:NP_001263428.1 Gene:naa38 / 100038287 XenbaseID:XB-GENE-5856115 Length:113 Species:Xenopus tropicalis


Alignment Length:74 Identity:36/74 - (48%)
Similarity:48/74 - (64%) Gaps:5/74 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 RRKLQKWLGRVLRIVITDGRVLVGFFNCTDRDANIVLSMCAEYLVEG-----QEPRLLGNVMVPG 101
            |.||:..|.|.:||.:||||.|:|.|.|||||.|::|....|:|...     :|||:||..||||
 Frog    30 RHKLESLLNRNMRIEMTDGRSLIGCFLCTDRDCNVILGSAQEFLRPSDSFPVREPRVLGLAMVPG 94

  Fly   102 QHIVSLSID 110
            .||||:.::
 Frog    95 HHIVSIQVE 103

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SbatNP_001259971.1 LSMD1 42..110 CDD:212486 36/72 (50%)
naa38NP_001263428.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..29
LSMD1 30..103 CDD:212486 36/72 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 69 1.000 Domainoid score I9501
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 72 1.000 Inparanoid score I5133
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1549327at2759
OrthoFinder 1 1.000 - - FOG0004610
OrthoInspector 1 1.000 - - oto103507
Panther 1 1.100 - - LDO PTHR10701
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6149
SonicParanoid 1 1.000 - - X4939
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1010.100

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