DRSC/TRiP Functional Genomics Resources

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Protein Alignment LysRS and epmA

DIOPT Version :10

Sequence 1:NP_727353.1 Gene:LysRS / 31904 FlyBaseID:FBgn0027084 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_418579.2 Gene:epmA / 948672 ECOCYCID:EG11211 Length:325 Species:Escherichia coli


Alignment Length:340 Identity:96/340 - (28%)
Similarity:153/340 - (45%) Gaps:54/340 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   263 RAKIISYVRQFLDRLGFLEIETPMMNMIAGGATAK-----PFVTH-----HNDLKMDLFMRIAPE 317
            ||.|::.:|:|....|.||:|||.|:.    ||..     ||.|.     |:. .|:|::..:||
E. coli    19 RAAIMAEIRRFFADRGVLEVETPCMSQ----ATVTDIHLVPFETRFVGPGHSQ-GMNLWLMTSPE 78

  Fly   318 LYHKMLVVGGLDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYADIMDITEQLVSGMVKAIR 382
            .:.|.|:|.|...|:::.|.||||.:...||||||..|:|..:.|...:|:..:.|:.       
E. coli    79 YHMKRLLVAGCGPVFQLCRSFRNEEMGRYHNPEFTMLEWYRPHYDMYRLMNEVDDLLQ------- 136

  Fly   383 GSYKVIYHPEGPEGPEQELDFTPPFKR------VSMIKTLEEKLQVKFPAADTFNSPETNQFLSQ 441
               :|:..|..     :.|.:...|.|      :|..||...::..|...::..::.|....|.|
E. coli   137 ---QVLDCPAA-----ESLSYQQAFLRYLEIDPLSADKTQLREVAAKLDLSNVADTEEDRDTLLQ 193

  Fly   442 LCAKHQVECPAPRTTARLLDKLVGEFIEEFCVNPTFICEHPQIMSPLAKYHRSIPGLTERFELFV 506
            |.....||   |.         :|:      ..|||:...|...:.||:.......:.||||::.
E. coli   194 LLFTFGVE---PN---------IGK------EKPTFVYHFPASQASLAQISTEDHRVAERFEVYY 240

  Fly   507 AKKEICNAYTELNDPVVQRERFEQQASDKAAGDDEAQLVDENFCTSLEYGLPPTGGFGMGIDRLA 571
            ...|:.|.:.||.|...|::||||....:||.......:|:|...:|:.|:|...|..:|:|||.
E. coli   241 KGIELANGFHELTDAREQQQRFEQDNRKRAARGLPQHPIDQNLIEALKVGMPDCSGVALGVDRLV 305

  Fly   572 MFLTDSNNIKEVLLF 586
            |....:..:.||:.|
E. coli   306 MLALGAETLAEVIAF 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LysRSNP_727353.1 PLN02502 42..593 CDD:215278 96/340 (28%)
epmANP_418579.2 PRK09350 12..317 CDD:236474 93/335 (28%)

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