DRSC/TRiP Functional Genomics Resources

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Protein Alignment LysRS and lysS

DIOPT Version :10

Sequence 1:NP_727353.1 Gene:LysRS / 31904 FlyBaseID:FBgn0027084 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_417366.1 Gene:lysS / 947372 ECOCYCID:EG10552 Length:505 Species:Escherichia coli


Alignment Length:507 Identity:208/507 - (41%)
Similarity:307/507 - (60%) Gaps:22/507 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 NEYFKLRSAAVQELKRSPATDPYPHKFHVSSSLEDFIAKYENSLKEGETLE--NVKLSVAGRVHA 150
            |...|.|...:..|:.....  :|:.|....:.:...|:::.  ||.|.||  |::::||||:..
E. coli    16 NNELKTRREKLANLREQGIA--FPNDFRRDHTSDQLHAEFDG--KENEELEALNIEVAVAGRMMT 76

  Fly   151 IRESGAKLIFYDLRGEGVKVQVMASAKSYKSEADFEIDTSKLRRGDIIGVVGHPGKTKKGELSVM 215
            .|..| |..|..|:..|.::|:.. |:....|..:.....|...|||:|..|...|||.||||:.
E. coli    77 RRIMG-KASFVTLQDVGGRIQLYV-ARDDLPEGVYNEQFKKWDLGDILGAKGKLFKTKTGELSIH 139

  Fly   216 PSEIKLLSPCLHMLPHLHFGLKDKETRYRQRYLDLILNNNVREKFQIRAKIISYVRQFLDRLGFL 280
            .:|::||:..|..||....||:|:|.||||||||||.|:..|..|::|::|:|.:|||:...||:
E. coli   140 CTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQILSGIRQFMVNRGFM 204

  Fly   281 EIETPMMNMIAGGATAKPFVTHHNDLKMDLFMRIAPELYHKMLVVGGLDRVYEIGRQFRNEGIDL 345
            |:|||||.:|.|||.|:||:||||.|.:|:::|||||||.|.|||||.:||:||.|.||||||.:
E. coli   205 EVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNEGISV 269

  Fly   346 THNPEFTTCEFYMAYADYADIMDITEQLVSGMVKAIRGSYKVIYHPEGPEGPEQELDFTPPFKRV 410
            .||||||..|.|||||||.|::::||.|...:.:.|.|..:|.|       .:..|||..||:::
E. coli   270 RHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKTEVTY-------GDVTLDFGKPFEKL 327

  Fly   411 SMIKTLEE-KLQVKFPAADTFNSPETNQFLSQLCAKHQVECPAPRTTARLLDKLVGEFIEEFCVN 474
            :|.:.::: :.:......|.|:|.:.      :.....:.........|::.::..|..|...:.
E. coli   328 TMREAIKKYRPETDMADLDNFDSAKA------IAESIGIHVEKSWGLGRIVTEIFEEVAEAHLIQ 386

  Fly   475 PTFICEHPQIMSPLAKYHRSIPGLTERFELFVAKKEICNAYTELNDPVVQRERFEQQASDKAAGD 539
            ||||.|:|..:||||:.:...|.:|:|||.|:..:||.|.::||||...|.:||..|.:.|.|||
E. coli   387 PTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAQRFLDQVAAKDAGD 451

  Fly   540 DEAQLVDENFCTSLEYGLPPTGGFGMGIDRLAMFLTDSNNIKEVLLFPAMKP 591
            |||...||::.|:||:|||||.|.|:||||:.|..|:|:.|::|:|||||:|
E. coli   452 DEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFPAMRP 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LysRSNP_727353.1 PLN02502 42..593 CDD:215278 208/507 (41%)
lysSNP_417366.1 lysS 14..503 CDD:234778 207/505 (41%)

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