DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment LysRS and DED81

DIOPT Version :9

Sequence 1:NP_001188571.1 Gene:LysRS / 31904 FlyBaseID:FBgn0027084 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_011883.1 Gene:DED81 / 856412 SGDID:S000001061 Length:554 Species:Saccharomyces cerevisiae


Alignment Length:591 Identity:122/591 - (20%)
Similarity:219/591 - (37%) Gaps:153/591 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 AGKKKSSAAEEE----EISPNEYFKLRSAAV-------------------QELKRSPATDPYPHK 113
            |.::||.|.|.:    :...|||.::.::|:                   ||||:....      
Yeast    34 ASQQKSDATEPKLFVFKTEDNEYQEISASALKKARKGCDGLKKKAVKQKEQELKKQQKE------ 92

  Fly   114 FHVSSSLEDFIAKYENSLKEGETLE--------------NVKLSVAGRVHAIRESGAKLIFYDLR 164
               :.:....::....::||.|:|.              ..::.|:|.:|.:| |..|:||..||
Yeast    93 ---AENAAKQLSALNITIKEDESLPAAIKTRIYDSYSKVGQRVKVSGWIHRLR-SNKKVIFVVLR 153

  Fly   165 -GEGVKVQVMASAKSYKSEA-DFEIDTSKLRRGDIIGVVGHPGKTKKG--ELSVMPSEIKLLSPC 225
             |.|....|::...:...:. |..::::....|.|:.:  ..|||..|  ||:|...|:..|:| 
Yeast   154 DGSGFIQCVLSGDLALAQQTLDLTLESTVTLYGTIVKL--PEGKTAPGGVELNVDYYEVVGLAP- 215

  Fly   226 LHMLPHLHFGLKDKETR-----------YRQRYLDLILNNNVREKFQIRAKIISYVRQFLDRLGF 279
                     |.:|..|.           ..||:|.| ..:.:....::||.::..||:..|....
Yeast   216 ---------GGEDSFTNKIAEGSDPSLLLDQRHLAL-RGDALSAVMKVRAALLKSVRRVYDEEHL 270

  Fly   280 LEIETPMM--NMIAGGATAKPFVTHHNDLKM-----DLFMRIAPELYHKMLVVGGLDRVYEIGRQ 337
            .|:..|.|  ..:.||:|.         .||     :.::..:.:||.: ..:..|..||.|...
Yeast   271 TEVTPPCMVQTQVEGGSTL---------FKMNYYGEEAYLTQSSQLYLE-TCLASLGDVYTIQES 325

  Fly   338 FRNE-GIDLTHNPEFTTCEFYMAYADYADIMDITEQLV-------------SGMVKAIRGSYKVI 388
            ||.| .....|..|:|..|..:|:..:.|::...|.|:             ..:||.:..::|  
Yeast   326 FRAEKSHTRRHLSEYTHIEAELAFLTFDDLLQHIETLIVKSVQYVLEDPIAGPLVKQLNPNFK-- 388

  Fly   389 YHPEGPEGPEQELDFTPPFKRVSMIKTLEEKLQVKFPAADTFNSPETNQFLSQLCAKHQVECPAP 453
                .|:.|...|.:.      ..|..|.|. .:|....:.|      :|...:.          
Yeast   389 ----APKAPFMRLQYK------DAITWLNEH-DIKNEEGEDF------KFGDDIA---------- 426

  Fly   454 RTTARLLDKLVGEFIEEFCVNPTFICEHP-QIMSPLAKYHRSIPGLTERFELFVAK-KEICNAYT 516
            ....|.:...:|.        |.|:...| :|.|...|.....|.:||..::.:.. .||.....
Yeast   427 EAAERKMTDTIGV--------PIFLTRFPVEIKSFYMKRCSDDPRVTESVDVLMPNVGEITGGSM 483

  Fly   517 ELNDPVVQRERFEQQASDKAAGDDEAQLVDENFCTSLEYGLPPTGGFGMGIDRLAMFLTDSNNIK 581
            .::|.......|:::..|.   |.....:|:.     :||..|.||:|:|.:|:..:|.|...::
Yeast   484 RIDDMDELMAGFKREGIDT---DAYYWFIDQR-----KYGTCPHGGYGIGTERILAWLCDRFTVR 540

  Fly   582 EVLLFP 587
            :..|:|
Yeast   541 DCSLYP 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LysRSNP_001188571.1 PLN02502 42..593 CDD:215278 122/591 (21%)
LysRS_N 141..250 CDD:239817 32/123 (26%)
LysRS_core 253..591 CDD:238398 72/358 (20%)
DED81NP_011883.1 AsnS 116..554 CDD:223096 105/500 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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