DRSC/TRiP Functional Genomics Resources

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Protein Alignment LysRS and Nars2

DIOPT Version :9

Sequence 1:NP_001188571.1 Gene:LysRS / 31904 FlyBaseID:FBgn0027084 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_705819.3 Gene:Nars2 / 244141 MGIID:2142075 Length:477 Species:Mus musculus


Alignment Length:506 Identity:107/506 - (21%)
Similarity:184/506 - (36%) Gaps:154/506 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   162 DLRGEGVKVQ-----------VM-------ASAKSYKSEADFEIDTSKLRRGDIIGVVGH--PGK 206
            |.|||.|.||           |:       :|.:|.:..||...|:.:|..|..:.|.|.  ..:
Mouse    38 DARGECVTVQGWIRSVRSQKEVLFLHVNDGSSLESLQIVADSSFDSRELTFGSSVQVQGQLVKSQ 102

  Fly   207 TKKGELSVMPSEIKLLSPCLHMLPHLHFGLKDKE---TRYRQRYLDLILNNN-----VREKFQIR 263
            :|:..:.:...:|:::..|    ....|.:|.||   ..|.::|..|....|     :|.:.:..
Mouse   103 SKRQNVELKAEKIEVIGDC----EAKAFPIKYKERHPLEYLRQYPHLRCRTNALGSILRVRSEAT 163

  Fly   264 AKIISYVRQFLDRLGFLEIETPMM--NMIAGGA-------TAKPFVTHHNDLKMDLFMRIAPELY 319
            |.|.||   |.|. ||:.|.||::  |...|..       ::|......:...:..|:.::.:| 
Mouse   164 AAIHSY---FKDN-GFVHIHTPVLTSNDCEGAGELFQVEPSSKIKGPKESFFDVPAFLTVSGQL- 223

  Fly   320 HKMLVVGGLDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYA------DIMDITEQLVSGMV 378
            |..::.|...:|:..|..||.|......:    ..||||..|:.:      |:|.:.|:|.....
Mouse   224 HLEVMSGAFTQVFTFGPTFRAENSQSRRH----LAEFYMVEAEISFVESLQDLMQVMEELFKATT 284

  Fly   379 KAIRGSYKVIYH-PEGPE--------GPEQELDFTPPFKRVSMIKTLEEKLQVKFPAADTFNSPE 434
            :      .|:.| ||..|        |.:..|:..  .|...:|.:..|.:::...|:..|  ..
Mouse   285 E------MVLSHCPEDVELCHQFIAAGQKGRLEHM--LKNNFLIISYTEAIEILKQASQNF--AF 339

  Fly   435 TNQFLSQLCAKHQVECPAPRTTARLLDKLVGEFIEEFCVN-PTFICEHPQIMSPLAKYHRS---- 494
            |.::...|..:|:                  :::...|.| |.|:..:|..:.|.  |.|.    
Mouse   340 TPKWGVDLQTEHE------------------KYLVRHCGNIPVFVINYPSELKPF--YMRENEDG 384

  Fly   495 -----------IPGLTERF------------ELFVAKKEICNAYTELNDPVVQRERFEQQASDKA 536
                       :||:.|.|            |..:|:..:..||                     
Mouse   385 PQNTVAAVDLLVPGVGELFGGSLREERYHVLEQRLARSGLTKAY--------------------- 428

  Fly   537 AGDDEAQLVDENFCTSLEYGLPPTGGFGMGIDRLAMFLTDSNNIKEVLLFP 587
                      :.:....::|..|.||||||.:|....:...:|||:|:.||
Mouse   429 ----------QWYLDLRKFGSVPHGGFGMGFERYLQCILGVDNIKDVIPFP 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LysRSNP_001188571.1 PLN02502 42..593 CDD:215278 107/506 (21%)
LysRS_N 141..250 CDD:239817 26/110 (24%)
LysRS_core 253..591 CDD:238398 80/392 (20%)
Nars2NP_705819.3 asnC 27..474 CDD:235176 107/506 (21%)
EcAsnRS_like_N 44..119 CDD:239813 15/74 (20%)
AsxRS_core 133..473 CDD:238399 83/407 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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