Protein Alignment Rrp40 and RRP4

DIOPT Version :9

• Sequence 1: NP_001285565.1
• Gene: Rrp40 / 319033
• FlyBaseID: FBgn0260648
• Length: 232
• Species: Drosophila melanogaster
• Sequence 2: NP_011936.1
• Gene: RRP4 / 856466
• SGDID: S000001111
• Length: 359
• Species: Saccharomyces cerevisiae
• Alignment Length: 255
• Identity: 62/255 - (24%)
• Similarity: 87/255 - (34%)
• Gaps: 92/255 - (36%)

  Fly     5 STIVMPGERIAAIEELAKSKRVILGPGLRRLDDTVVASKAGPLRHKEPGTFWVDN---------- 59
            |.||.|||.:.                    ||        |:..:..||:::||
Yeast    52 SQIVTPGELVT--------------------DD--------PIWMRGHGTYFLDNMTYSSVAGTV 88

  Fly    60 -----------YQRRYIPARGDLILGIVRAKAGDLYRVDIGATDTA-----------SISYLAFE 102
                       .:.||.|..||.::|.:.......::||||....|           .|.....|
Yeast    89 SRVNRLLSVIPLKGRYAPETGDHVVGRIAEVGNKRWKVDIGGKQHAVLMLGSVNLPGGILRRKSE 153

  Fly   103 AASKKNRPDLIPGDLIYARVLNASADIEPELVCVNSVGKSGKLGVLTDGFFFKCSLNLGRMLLRE 167
            :...:.|..|..|||:.|.|.:...|....|..     :|.|.|.|.:|.|
Yeast   154 SDELQMRSFLKEGDLLNAEVQSLFQDGSASLHT-----RSLKYGKLRNGMF-------------- 199

  Fly   168 NCPVLAAL-------TRELPYEIAV--GVNGRIWLKAHS---LKETVALANAISALEQSG 215
             |.|.::|       |..||..|.|  ||||.|||:..|   |......||..|:::.:|
Yeast   200 -CQVPSSLIVRAKNHTHNLPGNITVVLGVNGYIWLRKTSQMDLARDTPSANNSSSIKSTG 258

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rrp40	NP_001285565.1	Rrp4	5..213	CDD:224022	61/251 (24%)
		S1_Rrp40	63..148	CDD:240216	25/95 (26%)
RRP4	NP_011936.1	Rrp4	45..316	CDD:224022	62/255 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1097
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810