Protein Alignment Rrp40 and Exosc3

DIOPT Version :9

• Sequence 1: NP_001285565.1
• Gene: Rrp40 / 319033
• FlyBaseID: FBgn0260648
• Length: 232
• Species: Drosophila melanogaster
• Sequence 2: NP_079789.1
• Gene: Exosc3 / 66362
• MGIID: 1913612
• Length: 274
• Species: Mus musculus
• Alignment Length: 247
• Identity: 103/247 - (41%)
• Similarity: 159/247 - (64%)
• Gaps: 25/247 - (10%)

  Fly     7 IVMPGERI-------------AAIEEL-----AKSK-RVILGPGLRRLDDTVVASKAGPLRHKEP 52
            :|:|||.:             |..:.|     |:.: ||:.||||||..|.::.:|.|.||||||
Mouse    27 VVLPGEELVLPDHEDVDGLGGAGEQPLRLNAGARPRLRVVCGPGLRRCGDRLLVTKCGRLRHKEP 91

  Fly    53 -----GTFWVDNYQRRYIPARGDLILGIVRAKAGDLYRVDIGATDTASISYLAFEAASKKNRPDL 112
                 |.:|||:.|:||:|.:||.::|||.||:||:::||:|.::.||:||||||.|:|:|||::
Mouse    92 SGGGGGVYWVDSQQKRYVPVKGDHVIGIVIAKSGDIFKVDVGGSEPASLSYLAFEGATKRNRPNV 156

  Fly   113 IPGDLIYARVLNASADIEPELVCVNSVGKSGKLGVL-TDGFFFKCSLNLGRMLLRENCPVLAALT 176
            ..|||||.:.:.|:.|:|||:||::|.|::..:||: .||..||.:|.|.|.||..:|.::..|.
Mouse   157 QVGDLIYGQCVVANKDMEPEMVCIDSCGRANGMGVIGQDGLLFKVTLGLIRKLLAPDCEIVQELG 221

  Fly   177 RELPYEIAVGVNGRIWLKAHSLKETVALANAISALEQSGCAEIDKICGNLGD 228
            :..|.||..|:|||||:||.::::|:.|||.:.|.|.....:..:|...|.:
Mouse   222 KLYPLEIVFGMNGRIWVKAKTIQQTLILANVLEACEHMTTEQRKQIFARLAE 273

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rrp40	NP_001285565.1	Rrp4	5..213	CDD:224022	100/230 (43%)
		S1_Rrp40	63..148	CDD:240216	43/84 (51%)
Exosc3	NP_079789.1	S1_Rrp40	107..192	CDD:240216	43/84 (51%)
		KH_6	196..242	CDD:292607	21/45 (47%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C167842053
Domainoid	1	1.000	149	1.000	Domainoid score	I4425
eggNOG	1	0.900	-	-		E1_COG1097
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H6867
Inparanoid	1	1.050	201	1.000	Inparanoid score	I3765
Isobase	1	0.950	-	0.878984	Normalized mean entropy	S1604
OMA	1	1.010	-	-		QHG54235
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0004390
OrthoInspector	1	1.000	-	-		oto92001
orthoMCL	1	0.900	-	-		OOG6_102463
Panther	1	1.100	-	-	LDO	PTHR21321
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R2268
SonicParanoid	1	1.000	-	-		X3108
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	17	16.740