Protein Alignment Rrp40 and exosc2

DIOPT Version :9

• Sequence 1: NP_001285565.1
• Gene: Rrp40 / 319033
• FlyBaseID: FBgn0260648
• Length: 232
• Species: Drosophila melanogaster
• Sequence 2: NP_001017572.2
• Gene: exosc2 / 550234
• ZFINID: ZDB-GENE-050417-27
• Length: 295
• Species: Danio rerio
• Alignment Length: 228
• Identity: 54/228 - (23%)
• Similarity: 88/228 - (38%)
• Gaps: 55/228 - (24%)

  Fly     7 IVMPGERIAAIEELAKSKRVILGPGLRRLDDTVVASKAGPLRHKEPGTFWVDNYQRRYIPARGDL 71
            :|:||:.|.:      ....:.|.|....:|.:.||.||.:..... ...|...:.||....||:
Zfish    28 LVVPGDVITS------DTGFMRGHGTYMDEDRLTASVAGQVERVNK-LICVKPLKTRYNGEVGDV 85

  Fly    72 ILGIVRAKAGDLYRVDIGATDTASISYLAFEAAS-------KKNRPD-------LIPGDLIYARV 122
            ::|.:.......::|:   |::...|.|...|.:       :::..|       |..||||.|.|
Zfish    86 VVGRITEVQQKRWKVE---TNSRLDSVLLLSAVNLPGGELRRRSTQDELAMRDYLQEGDLISAEV 147

  Fly   123 LNASADIEPELVCVNSVGKSGKLGVLTDGFFFKCSLNLGRMLLRE-----NCPVLAALTRELPYE 182
            .:..:|     ..::...:|.|.|.|..|.....|.:|   :.|:     |.|..|:|
Zfish   148 QSIFSD-----GALSLHTRSLKYGKLGQGVLVYVSPSL---VKRQKTHFHNLPCGASL------- 197

  Fly   183 IAVGVNGRIWLKAHSLKETVALANAISALEQSG 215
             .:|.||.:|     |..|.||..     ||:|
Zfish   198 -ILGNNGYVW-----LSPTPALQE-----EQAG 219

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rrp40	NP_001285565.1	Rrp4	5..213	CDD:224022	51/224 (23%)
		S1_Rrp40	63..148	CDD:240216	22/98 (22%)
exosc2	NP_001017572.2	ECR1_N	28..65	CDD:291080	11/42 (26%)
		S1_Rrp4	77..168	CDD:240215	22/98 (22%)
		KH_6	171..211	CDD:292607	13/55 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1097
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.810