Protein Alignment Rrp40 and Exosc2

DIOPT Version :9

• Sequence 1: NP_001285565.1
• Gene: Rrp40 / 319033
• FlyBaseID: FBgn0260648
• Length: 232
• Species: Drosophila melanogaster
• Sequence 2: NP_001102422.1
• Gene: Exosc2 / 366017
• RGDID: 1306573
• Length: 293
• Species: Rattus norvegicus
• Alignment Length: 207
• Identity: 44/207 - (21%)
• Similarity: 78/207 - (37%)
• Gaps: 47/207 - (22%)

  Fly     7 IVMPGERIAAIEELAKSKRVILGPGLRRLDDTVVASKAGPLRHKEPGTFWVDNYQRRYIPARGDL 71
            :|:||:.|.......:.....:|      ::.::||.||.:..... ...|...:.||....||:
  Rat    26 LVVPGDTITTDTGFMRGHGTYMG------EEKLIASVAGSVERVNK-LICVKALKTRYNGEVGDI 83

  Fly    72 ILGIVRAKAGDLYRVDIGATDTASISYLAFEAAS-------KKNRPD-------LIPGDLIYARV 122
            ::|.:.......::|:   |::...|.|...:.:       :::..|       |..||||.|.|
  Rat    84 VVGRITEVQQKRWKVE---TNSRLDSVLLLSSMNLPGGELRRRSAEDELAMRGFLQEGDLISAEV 145

  Fly   123 LNASADIEPELVCVNSVGKSGKLGVLTDGFFFKCSLNLGRMLLRENCPVLAALTR----ELP--Y 181
            ....:|     ..|:...:|.|.|.|..|...:.|            |.|....:    :||  .
  Rat   146 QAVFSD-----GAVSLHTRSLKYGKLGQGALVQVS------------PALVKRQKTHFHDLPCGA 193

  Fly   182 EIAVGVNGRIWL 193
            .:.:|.||.||:
  Rat   194 SVILGNNGFIWI 205

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rrp40	NP_001285565.1	Rrp4	5..213	CDD:224022	44/207 (21%)
		S1_Rrp40	63..148	CDD:240216	22/98 (22%)
Exosc2	NP_001102422.1	Rrp4	22..243	CDD:224022	44/207 (21%)
		KH-I_Rrp4_eukar	169..285	CDD:411953	11/49 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1097
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810