Protein Alignment Rrp40 and exos-2

DIOPT Version :9

• Sequence 1: NP_001285565.1
• Gene: Rrp40 / 319033
• FlyBaseID: FBgn0260648
• Length: 232
• Species: Drosophila melanogaster
• Sequence 2: NP_500978.1
• Gene: exos-2 / 177403
• WormBaseID: WBGene00022232
• Length: 303
• Species: Caenorhabditis elegans
• Alignment Length: 240
• Identity: 57/240 - (23%)
• Similarity: 83/240 - (34%)
• Gaps: 77/240 - (32%)

  Fly     7 IVMPGERIAAIEELAKSKRVILGPGLRRLDDTVVASKAGPLRHKEPGTFWVDNYQRRYIPARGDL 71
            ||:||..:....:     :.:.|.|....|..:|:|.:|.::... ....|...::||....||:
 Worm    31 IVIPGHSVCDAPQ-----QFMRGHGTYVRDGEIVSSLSGVVQQLN-RLLMVKTIKQRYAGEVGDV 89

  Fly    72 I-------------------------LGIVRAKAGDLYRVDIGATDTASISYLAFEAASKKNRPD 111
            :                         ||.|....||..|.|:...:..| .:|       ||
 Worm    90 VVARVVEVQAKRWKCDVASRLHANLPLGSVLLPGGDFRRKDVEDEEKMS-EFL-------KN--- 143

  Fly   112 LIPGDLIYARVLNASADIEPELVCVNSVGKSGKLGVLTDGFFFKCSLNLGRMLLRENCPVLAALT 176
               |:||.|.|.....|....|...|:     |.|.|..|...|..            |.|...:
 Worm   144 ---GELICAEVQQVQHDGTLMLHTRNN-----KYGKLQQGILIKVP------------PHLIKKS 188

  Fly   177 RE----LPYEIAV--GVNGRIWLKAHSLKETVALANAISALEQSG 215
            ::    |||.:||  |.||.:|: ..||.||        .||:.|
 Worm   189 KKHFHTLPYGMAVIIGCNGSVWV-TPSLPET--------TLEEDG 224

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rrp40	NP_001285565.1	Rrp4	5..213	CDD:224022	55/236 (23%)
		S1_Rrp40	63..148	CDD:240216	25/109 (23%)
exos-2	NP_500978.1	ECR1_N	31..68	CDD:291080	10/41 (24%)
		S1_Rrp4	81..172	CDD:240215	25/109 (23%)
		KH_6	175..214	CDD:292607	13/51 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1097
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810