Sequence 1: | NP_001285565.1 | Gene: | Rrp40 / 319033 | FlyBaseID: | FBgn0260648 | Length: | 232 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002936379.2 | Gene: | exosc3 / 100491278 | XenbaseID: | XB-GENE-966926 | Length: | 250 | Species: | Xenopus tropicalis |
Alignment Length: | 231 | Identity: | 96/231 - (41%) |
---|---|---|---|
Similarity: | 148/231 - (64%) | Gaps: | 19/231 - (8%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MSATS------TIVMPGE--------RIAAIE----ELAKSKRVILGPGLRRLDDTVVASKAGPL 47
Fly 48 RHKEPGTFWVDNYQRRYIPARGDLILGIVRAKAGDLYRVDIGATDTASISYLAFEAASKKNRPDL 112
Fly 113 IPGDLIYARVLNASADIEPELVCVNSVGKSGKLGVL-TDGFFFKCSLNLGRMLLRENCPVLAALT 176
Fly 177 RELPYEIAVGVNGRIWLKAHSLKETVALANAISALE 212 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rrp40 | NP_001285565.1 | Rrp4 | 5..213 | CDD:224022 | 93/227 (41%) |
S1_Rrp40 | 63..148 | CDD:240216 | 42/84 (50%) | ||
exosc3 | XP_002936379.2 | Rrp4 | 10..231 | CDD:224022 | 91/220 (41%) |
S1_Rrp40 | 81..166 | CDD:240216 | 42/84 (50%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 147 | 1.000 | Domainoid score | I4495 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 1 | 1.000 | - | - | H6867 | |
Inparanoid | 1 | 1.050 | 190 | 1.000 | Inparanoid score | I3771 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1284731at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0004390 | |
OrthoInspector | 1 | 1.000 | - | - | oto102309 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X3108 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
8 | 8.060 |