Protein Alignment Gga and GGA2

DIOPT Version :9

• Sequence 1: NP_572571.1
• Gene: Gga / 31902
• FlyBaseID: FBgn0030141
• Length: 660
• Species: Drosophila melanogaster
• Sequence 2: NP_011976.1
• Gene: GGA2 / 856508
• SGDID: S000001150
• Length: 585
• Species: Saccharomyces cerevisiae
• Alignment Length: 483
• Identity: 114/483 - (23%)
• Similarity: 193/483 - (39%)
• Gaps: 129/483 - (26%)

  Fly    18 PAQKIDELG------VQMFCIVVKSN---------AQLVHKAQ-----EMIVAKVRSTNVTE--- 59
            |.:|...||      :|..|.:..:.         |..:::.|     :..:|..:..|..|
Yeast    15 PVRKPQALGNPLLRKIQRACRMSLAEPDLALNLDIADYINEKQGAAPRDAAIALAKLINNRESHV 79

  Fly    60 ATRAISLLEECMTQCGDDFQDEASKFRFLNELIRLVSKKYKGAETP---HEVKQRIMECLLLWTT 121
            |..|:|||:..:..||..|..:.|:..|||||:    |::.| ..|   .::::.|:..:..|..
Yeast    80 AIFALSLLDVLVKNCGYPFHLQISRKEFLNELV----KRFPG-HPPLRYSKIQRLILTAIEEWYQ 139

  Fly   122 EFPQRQK-------IRDAYDMLRKEGDI--EHGTTEAAVAKRESVLGTIDE----------AMFA 167
            ...:...       |||.:.:|:.:|..  :...::.||.|..:.|.|..|          |...
Yeast   140 TICKHSSYKNDMGYIRDMHRLLKYKGYAFPKISESDLAVLKPSNQLKTASEIQKEQEIAQAAKLE 204

  Fly   168 KLIKSNNPENFKRANLLLQYRMAQEARRNDLLAQHRL--VLCEVQETMQLLNQMLDTYDPANQDV 230
            :||:...||:.:.||.|::. ||.....|.:.|:..:  .|.:::....|||:||::.|..|.|
Yeast   205 ELIRRGKPEDLREANKLMKI-MAGFKEDNAVQAKQAISSELNKLKRKADLLNEMLESPDSQNWD- 267

  Fly   231 SETLHELYKSCKKHKPIFQHLPQLLDDSDAQLVADTLDANCALLATMQRYKLL------------ 283
            :||..||:.:.|..:|.||.:.:...:.|| ||.|.|..|..:...::::.||
Yeast   268 NETTQELHSALKVAQPKFQKIIEEEQEDDA-LVQDLLKFNDTVNQLLEKFNLLKNGDSNAASQIH 331

  Fly   284 ---VPSPTRSTAAALTT-----------SAPTVA-SSVKSTASSTTATTSSNNAQLLNELLGDL- 332
               |.:|.:.::.|||.           .||:.. ::...|.:...|.||      :|:|||||
Yeast   332 PSHVSAPLQQSSGALTNEINLIDFNDLDEAPSQGNNNTNGTGTPAAAETS------VNDLLGDLT 390

  Fly   333 --------------------LIDGSNKAATTATTSLPNAAASGSNPLADLSDIFSSALAESEAKQ 377
                                ::.||::.|...||:      :.||...||..:.:.....:....
Yeast   391 DLSISNPSTANQASFGLGGDIVLGSSQPAPPVTTT------NNSNNTLDLLGLSTPQSPTNSQAV 449

  Fly   378 QSQPFQ-----NATTLLEPQVISQGTTT 400
            .|..|.     |.||         ||||
Yeast   450 NSSGFDLLMGFNPTT---------GTTT 468

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Gga	NP_572571.1	VHS_GGA	7..144	CDD:239624	35/160 (22%)
		GAT	210..284	CDD:281166	25/88 (28%)
		Alpha_adaptinC2	543..644	CDD:197886
GGA2	NP_011976.1	VHS_GGA_fungi	26..164	CDD:340795	30/142 (21%)
		GGA_N-GAT	199..233	CDD:408115	10/34 (29%)
		GAT_GGA_fungi	235..324	CDD:410583	27/90 (30%)
		Alpha_adaptinC2	475..583	CDD:397151

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG51934
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R2130
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	4	3.950