Protein Alignment Gga and AT5G16880

DIOPT Version :9

• Sequence 1: NP_572571.1
• Gene: Gga / 31902
• FlyBaseID: FBgn0030141
• Length: 660
• Species: Drosophila melanogaster
• Sequence 2: NP_001331679.1
• Gene: AT5G16880 / 831551
• AraportID: AT5G16880
• Length: 407
• Species: Arabidopsis thaliana
• Alignment Length: 418
• Identity: 73/418 - (17%)
• Similarity: 156/418 - (37%)
• Gaps: 102/418 - (24%)

  Fly    12 LERATNPAQKIDE-------------LGVQMFCIVVK----SNAQLVHKAQEMIVAKVRSTNVTE 59
            |.:..||..||.|             :.::: |.::.    ::.:|:...::.|:.|.......
plant    41 LFQGPNPTDKIVEDATTENLEEPDWDMNLEI-CDMINQETINSVELIRGIKKRIMMKQPRIQYL- 103

  Fly    60 ATRAISLLEECMTQCGDDFQDEASKFRFLNELIRLVSKKYKGAETPHEVKQRIMECLLL---W-- 119
               |:.|||.|:..|...|.:.|:: |.|:|:::|:       :.|..|.....:.|:|   |
plant   104 ---ALVLLETCVKNCEKAFSEVAAE-RVLDEMVKLI-------DDPQTVVNNRNKALMLIEAWGE 157

  Fly   120 -TTEFPQRQKIRDAYDMLRKEGDIEHGTTEAAVAKRESVLGTIDEAMFAKLIKSNNPENFKRANL 183
             |:|........:.|..|:..|....|....::|           .:|.....:..||    .|.
plant   158 STSELRYLPVFEETYKSLKARGIRFPGRDNESLA-----------PIFTPARSTPAPE----LNA 207

  Fly   184 LLQYRMAQEAR-------RNDLLAQHRLVLCEVQETMQLLNQMLDT---YDPANQDVSETLHELY 238
            .|...:.:.|.       |:....|.:......:.:::||:.:|.:   :|....|::.|   |.
plant   208 DLPQHVHEPAHIQYDVPVRSFTAEQTKEAFDIARNSIELLSTVLSSSPQHDALQDDLTTT---LV 269

  Fly   239 KSCKKHKPIFQHLPQLLDDSDAQLVADTLDANCALLATMQRYKLLVPSPTRSTAAALTTSAPTVA 303
            :.|::.:...|.:.:...:::| |:.:.|:.|..|:.|:.:|:.:     ...:|.||:..|.:.
plant   270 QQCRQSQTTVQRIIETAGENEA-LLFEALNVNDELVKTLSKYEEM-----NKPSAPLTSHEPAMI 328

  Fly   304 SSVKSTASSTTATTSSNNAQLLNELLGDLLIDGSNKAATTATTSL----PNAAASGSNPLADLSD 364
            ...:....|.                    |.|..::....::.:    .....||.:.:.||.:
plant   329 PVAEEPDDSP--------------------IHGREESLVRKSSGVRGGFHGGGGSGDDMMDDLDE 373

  Fly   365 IF--------SSALAESEAKQQSQPFQN 384
            :.        ||...:.:.|::....:|
plant   374 MIFGKKNGCDSSTNPDHDPKKEQSSSKN 401

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Gga	NP_572571.1	VHS_GGA	7..144	CDD:239624	32/154 (21%)
		GAT	210..284	CDD:281166	16/76 (21%)
		Alpha_adaptinC2	543..644	CDD:197886
AT5G16880	NP_001331679.1	VHS	49..177	CDD:340765	28/140 (20%)
		GAT_GGA-like_plant	237..313	CDD:410579	16/79 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910