DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gga and Wdfy1

DIOPT Version :10

Sequence 1:NP_572571.1 Gene:Gga / 31902 FlyBaseID:FBgn0030141 Length:660 Species:Drosophila melanogaster
Sequence 2:NP_001104749.1 Gene:Wdfy1 / 69368 MGIID:1916618 Length:410 Species:Mus musculus


Alignment Length:85 Identity:21/85 - (24%)
Similarity:37/85 - (43%) Gaps:12/85 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   182 NLLLQYRMAQEARRNDLLAQHR---LVLCEVQETMQLLNQMLD------TYDPANQDVSETLHEL 237
            |.::.:.:.....|..||..|.   ..||.:|.|.||::...|      ..|.:.::..:.|.. 
Mouse   221 NSVIMWDIGGRKGRTLLLQGHHDRVQSLCYLQLTRQLVSCSADGGIAVWNMDVSREEAPQWLES- 284

  Fly   238 YKSCKK-HKPIFQHLPQLLD 256
             .||:| .:|.|.::.|:.|
Mouse   285 -DSCQKCEQPFFWNIKQMWD 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GgaNP_572571.1 VHS_GGA_metazoan 8..144 CDD:340769
GAT_GGA_meta 201..283 CDD:410582 17/66 (26%)
Alpha_adaptinC2 543..644 CDD:197886
Wdfy1NP_001104749.1 WD40 <16..272 CDD:441893 12/50 (24%)
WD 1. /evidence=ECO:0000255 22..61
WD40 repeat 28..67 CDD:293791
WD 2. /evidence=ECO:0000255 66..105
WD40 repeat 71..111 CDD:293791
WD 3. /evidence=ECO:0000255 112..150
WD40 repeat 118..153 CDD:293791
WD 4. /evidence=ECO:0000255 153..192
WD40 repeat 158..196 CDD:293791
WD 5. /evidence=ECO:0000255 197..236 2/14 (14%)
WD40 repeat 202..239 CDD:293791 3/17 (18%)
WD 6. /evidence=ECO:0000255 240..279 9/38 (24%)
WD40 repeat 245..269 CDD:293791 7/23 (30%)
FYVE_WDFY1 279..354 CDD:277295 8/27 (30%)
WD 7. /evidence=ECO:0000255 364..403
WD40 repeat 369..393 CDD:293791
Blue background indicates that the domain is not in the aligned region.

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